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See other LRRC56 CNV Assays ›
Gene Symbol
LRRC56
Assay Reference Genome
Location

Chr.11:537155 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03800862_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115399

Gene Name:

 leucine rich repeat containing 56

Gene Aliases:

 -

Location:

 Chr.11:518967-554916 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LRRC56 XM_005252775.2 1 455 XP_005252832.1
XM_005252776.2 1 455 XP_005252833.1
XM_006718132.2 1 455 XP_006718195.1
XM_011519875.2 XP_011518177.1
XM_011519876.1 1 455 XP_011518178.1
XM_011519877.2 XP_011518179.1
XM_017017167.1 XP_016872656.1
XM_017017168.1 XP_016872657.1
AK024495.1 1 515 BAB15785.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv467634 Chr.11:511805 - 619789 on Build GRCh38 Loss LOC143666 LRRC56 RASSF7 MIR210 PHRF1 HRAS LMNTD2 IRF7 LOC101059906 MIR210HG CDHR5
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss LOC143666 IFITM3 PKP3 SIGIRR IRF7 IFITM2 LOC101059906 MIR210HG IFITM5 IFITM1 B4GALNT4 CDHR5 LRRC56 ANO9 RASSF7 MIR210 PHRF1 HRAS LMNTD2 RNH1 PGGHG PTDSS2
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion LOC143666 LRRC56 RASSF7 MIR210 PHRF1 HRAS LMNTD2 SCT IRF7 LOC101059906 MIR210HG CDHR5
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LOC143666 TSPAN4 MUC5B PKP3 LOC101927503 IRF7 MIR6744 MIR210HG PANO1 CDHR5 PNPLA2 LRRC56 MUC6 CHID1 SNORA52 LOC171391 PHRF1 HRAS SCT RPLP2 CRACR2B DEAF1 PDDC1 POLR2L SLC25A22 MUC5AC SIGIRR PIDD1 TOLLIP LOC101059906 AP2A2 B4GALNT4 TMEM80 ANO9 TALDO1 RASSF7 MIR210 CEND1 CD151 EPS8L2 LMNTD2 MUC2 RNH1 DRD4 PTDSS2
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LOC143666 TSPAN4 MUC5B LOC101927503 IRF7 TOLLIP-AS1 MIR6744 MIR210HG PANO1 CDHR5 PNPLA2 LRRC56 MUC6 CHID1 SNORA52 LOC171391 PHRF1 HRAS SCT RPLP2 CRACR2B DEAF1 PDDC1 POLR2L SLC25A22 MUC5AC SIGIRR PIDD1 TOLLIP LOC101059906 AP2A2 TMEM80 ANO9 TALDO1 RASSF7 MIR210 CEND1 CD151 EPS8L2 LMNTD2 MUC2 RNH1 DRD4 PTDSS2
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain LOC143666 IRF7 MIR210HG CDHR5 LRRC56 RASSF7 MIR210 PHRF1 HRAS LMNTD2 SCT DEAF1 DRD4
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain LOC143666 IRF7 LOC101059906 MIR210HG CDHR5 LRRC56 RASSF7 MIR210 PHRF1 HRAS LMNTD2 SCT RNH1 DEAF1 DRD4 PTDSS2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LOC143666 TSPAN4 PKP3 IRF7 MIR210HG PANO1 CDHR5 PNPLA2 LRRC56 CHID1 SNORA52 LOC171391 PHRF1 HRAS SCT RPLP2 CRACR2B DEAF1 PDDC1 POLR2L SLC25A22 SIGIRR PIDD1 LOC101059906 AP2A2 B4GALNT4 TMEM80 ANO9 TALDO1 RASSF7 MIR210 CEND1 CD151 EPS8L2 LMNTD2 RNH1 DRD4 PTDSS2
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LOC143666 TSPAN4 IRF7 MIR210HG PANO1 CDHR5 PNPLA2 LRRC56 CHID1 SNORA52 LOC171391 PHRF1 HRAS SCT RPLP2 CRACR2B DEAF1 PDDC1 POLR2L SLC25A22 PIDD1 LOC101059906 TMEM80 TALDO1 RASSF7 MIR210 CEND1 CD151 EPS8L2 LMNTD2 RNH1 DRD4 PTDSS2
nsv552855 Chr.11:532923 - 545087 on Build GRCh38 Loss LRRC56 HRAS

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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