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See other LRRC56 CNV Assays ›
Gene Symbol
LRRC56
Assay Reference Genome
Location

Chr.11:537155 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03800862_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115399

Gene Name:

 leucine rich repeat containing 56

Gene Aliases:

 -

Location:

 Chr.11:518967-554916 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LRRC56 XM_005252775.2 1 455 XP_005252832.1
XM_005252776.2 1 455 XP_005252833.1
XM_006718132.2 1 455 XP_006718195.1
XM_011519875.2 XP_011518177.1
XM_011519876.1 1 455 XP_011518178.1
XM_011519877.2 XP_011518179.1
XM_017017167.1 XP_016872656.1
XM_017017168.1 XP_016872657.1
AK024495.1 1 515 BAB15785.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss LMNTD2 LRRC56 RASSF7 IRF7 MIR210 LOC101059906 HRAS CDHR5 PHRF1 LOC143666 MIR210HG
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss ANO9 LMNTD2 IFITM2 IFITM3 LOC101059906 HRAS MIR210HG SIGIRR RNH1 LRRC56 RASSF7 IFITM5 IFITM1 PTDSS2 IRF7 MIR210 PKP3 B4GALNT4 CDHR5 PHRF1 LOC143666 PGGHG
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion LMNTD2 LRRC56 RASSF7 SCT IRF7 MIR210 LOC101059906 HRAS CDHR5 PHRF1 LOC143666 MIR210HG
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss ANO9 PIDD1 LMNTD2 TMEM80 SLC25A22 DRD4 PNPLA2 MIR6744 MUC5B LOC101059906 PANO1 LOC101927503 MIR210HG RPLP2 SIGIRR DEAF1 LOC171391 LRRC56 CHID1 PTDSS2 CD151 MIR210 B4GALNT4 MUC2 AP2A2 CDHR5 TOLLIP TALDO1 SCT PDDC1 POLR2L CEND1 TSPAN4 HRAS EPS8L2 CRACR2B SNORA52 RNH1 MUC5AC RASSF7 IRF7 PKP3 MUC6 PHRF1 LOC143666
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss ANO9 PIDD1 LMNTD2 TMEM80 SLC25A22 DRD4 TOLLIP-AS1 PNPLA2 MIR6744 MUC5B LOC101059906 PANO1 LOC101927503 MIR210HG RPLP2 SIGIRR DEAF1 LOC171391 LRRC56 CHID1 PTDSS2 CD151 MIR210 MUC2 AP2A2 CDHR5 TOLLIP TALDO1 SCT PDDC1 POLR2L CEND1 TSPAN4 HRAS EPS8L2 CRACR2B SNORA52 RNH1 MUC5AC RASSF7 IRF7 MUC6 PHRF1 LOC143666
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain LMNTD2 DRD4 SCT HRAS MIR210HG DEAF1 LRRC56 RASSF7 IRF7 MIR210 CDHR5 PHRF1 LOC143666
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion ANO9 PIDD1 LMNTD2 TMEM80 SLC25A22 DRD4 PNPLA2 LOC101059906 PANO1 MIR210HG RPLP2 SIGIRR DEAF1 LOC171391 LRRC56 CHID1 PTDSS2 CD151 MIR210 B4GALNT4 AP2A2 CDHR5 TALDO1 SCT PDDC1 POLR2L CEND1 TSPAN4 HRAS EPS8L2 CRACR2B SNORA52 RNH1 RASSF7 IRF7 PKP3 PHRF1 LOC143666
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain LMNTD2 DRD4 SCT LOC101059906 HRAS MIR210HG RNH1 DEAF1 LRRC56 RASSF7 PTDSS2 IRF7 MIR210 CDHR5 PHRF1 LOC143666
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PIDD1 LMNTD2 TMEM80 SLC25A22 DRD4 PNPLA2 LOC101059906 PANO1 MIR210HG RPLP2 DEAF1 LOC171391 LRRC56 CHID1 PTDSS2 CD151 MIR210 CDHR5 TALDO1 SCT PDDC1 POLR2L CEND1 TSPAN4 HRAS EPS8L2 CRACR2B SNORA52 RNH1 RASSF7 IRF7 PHRF1 LOC143666
nsv552855 Chr.11:532923 - 545087 on Build GRCh38 Loss LRRC56 HRAS

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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