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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:880617 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03802227_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_017018166.1 XP_016873655.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625087 Chr.11:860117 - 882352 on Build GRCh38 Gain TSPAN4 CHID1
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CD151 RPLP2 TSPAN4 CEND1 SNORA52 PDDC1 SLC25A22 POLR2L PANO1 CRACR2B PIDD1 CHID1 LOC171391 AP2A2 PNPLA2
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss IRF7 RPLP2 SIGIRR CEND1 PTDSS2 LMNTD2 DEAF1 PDDC1 PANO1 CRACR2B MUC2 PIDD1 TALDO1 CHID1 TOLLIP LOC171391 AP2A2 RNH1 PNPLA2 MUC5B LOC143666 PHRF1 CD151 TSPAN4 RASSF7 LOC101059906 MIR210 EPS8L2 MUC5AC SNORA52 MIR210HG LOC101927503 DRD4 SLC25A22 POLR2L CDHR5 TOLLIP-AS1 SCT ANO9 TMEM80 LRRC56 HRAS MUC6 MIR6744
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion IRF7 RPLP2 SIGIRR CEND1 PTDSS2 LMNTD2 DEAF1 PDDC1 PANO1 CRACR2B PIDD1 TALDO1 CHID1 LOC171391 AP2A2 RNH1 B4GALNT4 PNPLA2 LOC143666 PHRF1 CD151 TSPAN4 RASSF7 LOC101059906 MIR210 PKP3 EPS8L2 SNORA52 MIR210HG DRD4 SLC25A22 POLR2L CDHR5 SCT ANO9 TMEM80 LRRC56 HRAS
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion TSPAN4 MUC5AC LOC101927503 MUC2 TOLLIP-AS1 CHID1 BRSK2 TOLLIP AP2A2 MUC5B MUC6 MOB2 MIR6744
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion IRF7 RPLP2 CEND1 PTDSS2 LMNTD2 DEAF1 PDDC1 PANO1 CRACR2B PIDD1 TALDO1 CHID1 LOC171391 RNH1 PNPLA2 LOC143666 PHRF1 CD151 TSPAN4 RASSF7 LOC101059906 MIR210 EPS8L2 SNORA52 MIR210HG DRD4 SLC25A22 POLR2L CDHR5 SCT TMEM80 LRRC56 HRAS
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain CHID1 AP2A2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss IRF7 RPLP2 SIGIRR CEND1 PTDSS2 LMNTD2 DEAF1 PDDC1 PANO1 CRACR2B MUC2 PIDD1 TALDO1 CHID1 TOLLIP LOC171391 AP2A2 RNH1 B4GALNT4 PNPLA2 MUC5B LOC143666 PHRF1 CD151 TSPAN4 RASSF7 LOC101059906 MIR210 PKP3 EPS8L2 MUC5AC SNORA52 MIR210HG LOC101927503 DRD4 SLC25A22 POLR2L CDHR5 SCT ANO9 TMEM80 LRRC56 HRAS MUC6 MIR6744
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain TSPAN4 CHID1 AP2A2 MUC6
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion TSPAN4 MUC5AC LOC101927503 MUC2 TOLLIP-AS1 CHID1 BRSK2 TOLLIP AP2A2 MUC5B MUC6 MOB2 MIR6744
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss CRACR2B CD151 RPLP2 PIDD1 TSPAN4 CHID1 AP2A2 PNPLA2 SNORA52 POLR2L
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CD151 RPLP2 TSPAN4 CEND1 SNORA52 PDDC1 SLC25A22 POLR2L PANO1 CRACR2B PIDD1 CHID1 LOC171391 PNPLA2
esv32950 Chr.11:877601 - 882764 on Build GRCh38 Gain CHID1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CRACR2B CD151 TSPAN4 CHID1 PNPLA2 POLR2L
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CD151 RPLP2 TSPAN4 CEND1 SNORA52 PDDC1 SLC25A22 POLR2L PANO1 CRACR2B PIDD1 TALDO1 CHID1 LOC171391 PNPLA2

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