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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:872706 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03802814_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_017018166.1 XP_016873655.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625086 Chr.11:860117 - 882352 on Build GRCh38 Loss TSPAN4 CHID1
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain PIDD1 PNPLA2 SLC25A22 PDDC1 SNORA52 CRACR2B POLR2L RPLP2 CD151 LOC171391 CEND1 PANO1 AP2A2 TSPAN4 CHID1
nsv552887 Chr.11:841284 - 876755 on Build GRCh38 Loss POLR2L TSPAN4 CHID1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LMNTD2 MUC2 PDDC1 TOLLIP SNORA52 CRACR2B LRRC56 POLR2L SCT CEND1 IRF7 LOC101927503 AP2A2 MIR6744 ANO9 RASSF7 MUC5AC LOC143666 TSPAN4 CHID1 PHRF1 PIDD1 TALDO1 SIGIRR PNPLA2 MUC6 SLC25A22 HRAS LOC101059906 EPS8L2 TMEM80 RPLP2 CD151 LOC171391 PTDSS2 CDHR5 DRD4 MUC5B PANO1 MIR210 TOLLIP-AS1 RNH1 MIR210HG DEAF1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LMNTD2 PDDC1 SNORA52 CRACR2B LRRC56 POLR2L PKP3 SCT CEND1 IRF7 AP2A2 ANO9 RASSF7 LOC143666 TSPAN4 CHID1 PHRF1 PIDD1 TALDO1 SIGIRR PNPLA2 SLC25A22 HRAS LOC101059906 EPS8L2 TMEM80 RPLP2 CD151 LOC171391 PTDSS2 CDHR5 DRD4 B4GALNT4 PANO1 MIR210 RNH1 MIR210HG DEAF1
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion MUC2 MUC6 BRSK2 TOLLIP MUC5B LOC101927503 MOB2 AP2A2 TOLLIP-AS1 MIR6744 MUC5AC TSPAN4 CHID1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LMNTD2 PDDC1 SNORA52 CRACR2B LRRC56 POLR2L SCT CEND1 IRF7 RASSF7 LOC143666 TSPAN4 CHID1 PHRF1 PIDD1 TALDO1 PNPLA2 SLC25A22 HRAS LOC101059906 EPS8L2 TMEM80 RPLP2 CD151 LOC171391 PTDSS2 CDHR5 DRD4 PANO1 MIR210 RNH1 MIR210HG DEAF1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LMNTD2 MUC2 PDDC1 TOLLIP SNORA52 CRACR2B LRRC56 POLR2L PKP3 SCT CEND1 IRF7 LOC101927503 AP2A2 MIR6744 ANO9 RASSF7 MUC5AC LOC143666 TSPAN4 CHID1 PHRF1 PIDD1 TALDO1 SIGIRR PNPLA2 MUC6 SLC25A22 HRAS LOC101059906 EPS8L2 TMEM80 RPLP2 CD151 LOC171391 PTDSS2 CDHR5 DRD4 MUC5B B4GALNT4 PANO1 MIR210 RNH1 MIR210HG DEAF1
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain MUC6 AP2A2 TSPAN4 CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion MUC2 MUC6 BRSK2 TOLLIP MUC5B LOC101927503 MOB2 AP2A2 TOLLIP-AS1 MIR6744 MUC5AC TSPAN4 CHID1
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss PIDD1 PNPLA2 AP2A2 SNORA52 CRACR2B POLR2L RPLP2 CD151 TSPAN4 CHID1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss PIDD1 PNPLA2 SLC25A22 PDDC1 SNORA52 CRACR2B POLR2L RPLP2 CD151 LOC171391 CEND1 PANO1 TSPAN4 CHID1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain PNPLA2 CRACR2B POLR2L CD151 TSPAN4 CHID1
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion PIDD1 TALDO1 PNPLA2 SLC25A22 PDDC1 SNORA52 CRACR2B POLR2L RPLP2 CD151 LOC171391 CEND1 PANO1 TSPAN4 CHID1

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