Hs03859923_cn

• Gene Symbol: LNX2
• Assay Reference Genome Location: Chr.13:27621028 on build GRCh38
• Cytoband: 13q12.2

Target Gene Details

• Entrez Gene ID: 222484
• Gene Name: ligand of numb-protein X 2
• Gene Aliases: PDZRN1
• Location: Chr.13:27545913-27621106 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LNX2	XM_017020434.1			XP_016875923.1
	AK095319.1

Target Gene Details

• Entrez Gene ID: 51082
• Gene Name: RNA polymerase I subunit D
• Gene Aliases: AC19, POLR1C, RPA16, RPA9, RPAC2, RPC16, RPO1-3, TCS2
• Location: Chr.13:27620743-27667422 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
POLR1D	NM_001206559.1	1	286	NP_001193488.1
	XM_005266412.1	1	286	XP_005266469.1
	XM_005266414.2	1	286	XP_005266471.1
	XM_017020623.1	1	242	XP_016876112.1
	AK307356.1	1	83
	DB123903.1	1	286
	DR156229.1	1	258

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1039183	Chr.13:27600204 - 27632386 on Build GRCh38	Loss	LNX2 POLR1D

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-directed RNA polymerase, RNA metabolism protein, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

protein homooligomerization
transcription initiation from RNA polymerase I promoter
transcription elongation from RNA polymerase I promoter
termination of RNA polymerase I transcription
transcription from RNA polymerase III promoter
positive regulation of type I interferon production
positive regulation of gene expression, epigenetic

Function(s)

protein binding
zinc ion binding
PDZ domain binding
RNA polymerase I activity
RNA polymerase III activity
DNA binding
protein dimerization activity