Hs03897593_cn

• Gene Symbol: FAM189A1
• Assay Reference Genome Location: Chr.15:29126440 on build GRCh38
• Cytoband: 15q13.1

Target Gene Details

• Entrez Gene ID: 23359
• Gene Name: family with sequence similarity 189 member A1
• Gene Aliases: TMEM228
• Location: Chr.15:29120252-29570723 on Build GRCh38
• Assay Gene Location: Overlaps Intron 9 - Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAM189A1	NM_015307.1			NP_056122.1
	XM_011521407.2			XP_011519709.1
	AB011146.1			BAA25500.1
	AK295622.1
	DA327746.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1040778	Chr.15:28689598 - 30515727 on Build GRCh38	Loss	GOLGA6L7P LOC105370746 LOC100130111 APBA2 GOLGA8M DKFZP434L187 LOC101060569 ULK4P3 LOC105370751 WHAMMP2 LOC100289656 PDCD6IPP2 GOLGA8T LOC107984752 FAM189A1 CHRFAM7A TJP1 NSMCE3 GOLGA8J GOLGA8R
nsv515798	Chr.15:29068198 - 29146274 on Build GRCh38	Gain+Loss	APBA2 FAM189A1
nsv471232	Chr.15:29087561 - 29139979 on Build GRCh38	Loss	APBA2 FAM189A1
nsv527255	Chr.15:28754022 - 30074044 on Build GRCh38	Gain	GOLGA6L7P WHAMMP2 LOC100289656 PDCD6IPP2 LOC100130111 APBA2 LOC107984752 FAM189A1 TJP1 NSMCE3
esv2751526	Chr.15:28724519 - 30687025 on Build GRCh38	Loss	LOC100288637 LOC105370746 APBA2 LOC100996413 LOC101927579 LOC101060569 ULK4P3 GOLGA8T LOC107984752 FAM189A1 CHRFAM7A TJP1 GOLGA8H GOLGA8J GOLGA6L7P LOC100130111 DKFZP434L187 LOC105370751 WHAMMP2 ARHGAP11B LOC100289656 PDCD6IPP2 NSMCE3 ULK4P2 GOLGA8R
nsv1039798	Chr.15:28724126 - 30158154 on Build GRCh38	Gain	GOLGA6L7P LOC100130111 APBA2 ULK4P3 WHAMMP2 LOC100289656 PDCD6IPP2 GOLGA8T LOC107984752 FAM189A1 TJP1 NSMCE3 GOLGA8J
nsv568675	Chr.15:29035149 - 29916451 on Build GRCh38	Gain	LOC100130111 APBA2 FAM189A1 TJP1 NSMCE3
nsv524362	Chr.15:29089598 - 29155854 on Build GRCh38	Loss	APBA2 FAM189A1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation