Hs03904085_cn

• Gene Symbol: SCG5
• Assay Reference Genome Location: Chr.15:32651456 on build GRCh38
• Cytoband: 15q13.3

Target Gene Details

• Entrez Gene ID: 6447
• Gene Name: secretogranin V
• Gene Aliases: 7B2, P7B2, SGNE1, SgV
• Location: Chr.15:32641669-32697097 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCG5	NM_001144757.1			NP_001138229.1
	NM_003020.3			NP_003011.1
	AK314965.1
	BC005349.1			AAH05349.1
	BC093053.1			AAH93053.1
	BP377248.1
	CR541824.1			CAG46623.1
	Y00757.1			CAA68726.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv517740	Chr.15:31727863 - 32666510 on Build GRCh38	Gain+Loss	CHRNA7 LOC100996255 LOC101060588 SCG5 LOC105370757 GOLGA8O ULK4P1 ARHGAP11A GOLGA8K LOC100653133 WHAMMP1 LOC101928042 GOLGA8N LOC105370940
nsv568913	Chr.15:32633875 - 33060788 on Build GRCh38	Gain	GREM1 LOC100131315 ARHGAP11A SCG5 LOC105370757 FMN1
nsv428302	Chr.15:31646275 - 32694378 on Build GRCh38	Gain+Loss	CHRNA7 LOC100996255 LOC101060588 SCG5 OTUD7A LOC105370757 GOLGA8O ULK4P1 ARHGAP11A GOLGA8K LOC100653133 WHAMMP1 LOC101928042 GOLGA8N LOC105370940
esv2760023	Chr.15:31474097 - 32694378 on Build GRCh38	Gain+Loss	CHRNA7 LOC100996255 LOC101060588 SCG5 OTUD7A LOC105370757 GOLGA8O ULK4P1 ARHGAP11A GOLGA8K LOC100653133 WHAMMP1 LOC101928042 GOLGA8N LOC105370940
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	CHRM5 SCG5 GOLGA8A LOC105370757 RYR3 NOP10 NUTM1 LOC101928134 GREM1 LOC100131315 ARHGAP11A AVEN TMCO5B SLC12A6 LPCAT4 FMN1 LOC101928042 GOLGA8B PGBD4 MIR1233-2 KATNBL1 EMC7 EMC4 MIR1233-1
nsv483039	Chr.15:32574635 - 32751321 on Build GRCh38	Gain	LOC100996255 GREM1 LOC100131315 ARHGAP11A SCG5 LOC105370757 LOC101928042 GOLGA8N
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	SCG5 GOLGA8A LOC105370757 RYR3 NOP10 NUTM1 LOC101928134 ARHGAP11A GOLGA8K TMCO5B LOC100653133 WHAMMP1 FMN1 LOC101928042 GOLGA8B PGBD4 KATNBL1 EMC4 LOC105370940 CHRNA7 LOC100996255 LOC101060588 CHRM5 GOLGA8O GREM1 ULK4P1 LOC100131315 AVEN SLC12A6 LPCAT4 MIR1233-2 GOLGA8N EMC7 MIR1233-1
esv3892661	Chr.15:32393132 - 32776080 on Build GRCh38	Gain	LOC100996255 LOC101060588 SCG5 LOC105370757 GOLGA8O GREM1 ULK4P1 LOC100131315 ARHGAP11A GOLGA8K LOC100653133 WHAMMP1 FMN1 LOC101928042 GOLGA8N
nsv469587	Chr.15:32529739 - 32694378 on Build GRCh38	Loss	LOC100996255 ARHGAP11A SCG5 LOC105370757 WHAMMP1 LOC101928042 GOLGA8N
esv2422296	Chr.15:32506737 - 32929014 on Build GRCh38	Duplication	LOC100996255 GREM1 LOC100131315 ARHGAP11A SCG5 LOC105370757 WHAMMP1 FMN1 LOC101928042 GOLGA8N
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	SCG5 GOLGA8A LOC105370757 RYR3 NOP10 NUTM1 LOC101928134 ARHGAP11A TMCO5B FMN1 LOC101928042 GOLGA8B PGBD4 KATNBL1 EMC4 CHRM5 GREM1 LOC100131315 AVEN SLC12A6 LPCAT4 MIR1233-2 GOLGA8N EMC7 MIR1233-1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Process(es)

intracellular protein transport
neuropeptide signaling pathway
peptide hormone processing
negative regulation of catalytic activity
regulation of hormone secretion

Function(s)

enzyme inhibitor activity
protein binding
GTP binding
unfolded protein binding