Hs03912598_cn

• Gene Symbol: SCG5
• Assay Reference Genome Location: Chr.15:32654906 on build GRCh38
• Cytoband: 15q13.3

Target Gene Details

• Entrez Gene ID: 6447
• Gene Name: secretogranin V
• Gene Aliases: 7B2, P7B2, SGNE1, SgV
• Location: Chr.15:32641669-32697097 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCG5	NM_001144757.1			NP_001138229.1
	NM_003020.3			NP_003011.1
	AK314965.1
	BC005349.1			AAH05349.1
	BC093053.1			AAH93053.1
	BP377248.1
	CR541824.1			CAG46623.1
	Y00757.1			CAA68726.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv517740	Chr.15:31727863 - 32666510 on Build GRCh38	Gain+Loss	GOLGA8K LOC101928042 SCG5 LOC105370940 LOC105370757 WHAMMP1 LOC101060588 LOC100653133 CHRNA7 ARHGAP11A GOLGA8O GOLGA8N ULK4P1 LOC100996255
nsv568913	Chr.15:32633875 - 33060788 on Build GRCh38	Gain	LOC100131315 SCG5 FMN1 ARHGAP11A LOC105370757 GREM1
esv3581613	Chr.15:32653911 - 32658714 on Build GRCh38	Loss	SCG5
nsv428302	Chr.15:31646275 - 32694378 on Build GRCh38	Gain+Loss	OTUD7A GOLGA8K LOC101928042 SCG5 LOC105370940 LOC105370757 WHAMMP1 LOC101060588 LOC100653133 CHRNA7 ARHGAP11A GOLGA8O GOLGA8N ULK4P1 LOC100996255
esv2760023	Chr.15:31474097 - 32694378 on Build GRCh38	Gain+Loss	OTUD7A GOLGA8K LOC101928042 SCG5 LOC105370940 LOC105370757 WHAMMP1 LOC101060588 LOC100653133 CHRNA7 ARHGAP11A GOLGA8O GOLGA8N ULK4P1 LOC100996255
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	MIR1233-1 LOC100131315 LOC101928134 LOC101928042 SCG5 CHRM5 NOP10 FMN1 GOLGA8B LOC105370757 GREM1 TMCO5B NUTM1 GOLGA8A AVEN LPCAT4 EMC7 SLC12A6 ARHGAP11A EMC4 PGBD4 MIR1233-2 KATNBL1 RYR3
nsv483039	Chr.15:32574635 - 32751321 on Build GRCh38	Gain	LOC100131315 LOC101928042 SCG5 ARHGAP11A LOC105370757 GREM1 GOLGA8N LOC100996255
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	MIR1233-1 GOLGA8K LOC100131315 LOC101928134 LOC101928042 FMN1 LOC105370940 GOLGA8B GREM1 TMCO5B WHAMMP1 LPCAT4 LOC100653133 CHRNA7 SLC12A6 EMC4 GOLGA8O KATNBL1 RYR3 SCG5 CHRM5 NOP10 LOC105370757 NUTM1 LOC101060588 GOLGA8A AVEN EMC7 ARHGAP11A PGBD4 MIR1233-2 GOLGA8N ULK4P1 LOC100996255
esv3892661	Chr.15:32393132 - 32776080 on Build GRCh38	Gain	GOLGA8K LOC100131315 LOC101928042 SCG5 FMN1 LOC105370757 GREM1 WHAMMP1 LOC101060588 LOC100653133 ARHGAP11A GOLGA8O GOLGA8N ULK4P1 LOC100996255
nsv469587	Chr.15:32529739 - 32694378 on Build GRCh38	Loss	WHAMMP1 LOC101928042 SCG5 ARHGAP11A LOC105370757 GOLGA8N LOC100996255
esv2422296	Chr.15:32506737 - 32929014 on Build GRCh38	Duplication	WHAMMP1 LOC100131315 LOC101928042 SCG5 FMN1 ARHGAP11A LOC105370757 GREM1 GOLGA8N LOC100996255
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	MIR1233-1 LOC100131315 LOC101928134 LOC101928042 FMN1 GOLGA8B GREM1 TMCO5B LPCAT4 SLC12A6 EMC4 KATNBL1 RYR3 SCG5 CHRM5 NOP10 LOC105370757 NUTM1 GOLGA8A AVEN EMC7 ARHGAP11A PGBD4 MIR1233-2 GOLGA8N

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Process(es)

intracellular protein transport
neuropeptide signaling pathway
peptide hormone processing
negative regulation of catalytic activity
regulation of hormone secretion

Function(s)

enzyme inhibitor activity
protein binding
GTP binding
unfolded protein binding