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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88878520 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03919709_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
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4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK090985.1
AK097904.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss CDT1 CBFA2T3 GALNS PABPN1L APRT LOC107987238 LOC100129697 LOC105371409 LOC101927793 TRAPPC2L PIEZO1
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain CDT1 LOC400558 LOC339059 LINC00304 PABPN1L APRT CTU2 LOC105371409 SLC22A31 PIEZO1 CBFA2T3 ZNF778 GALNS ACSF3 LOC107987238 LOC100129697 LOC101927793 CDH15 LOC100289580 TRAPPC2L MIR4722
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion CBFA2T3 PABPN1L LOC101927793
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss CDT1 LOC400558 LINC00304 PABPN1L APRT LOC105371409 SLC22A31 CBFA2T3 GALNS ACSF3 LOC107987238 LOC100129697 LOC101927793 CDH15 TRAPPC2L
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain CDT1 LOC400558 LOC339059 LINC00304 PABPN1L APRT ANKRD11 LOC105371409 SLC22A31 PIEZO1 CBFA2T3 ZNF778 GALNS LOC100287036 ACSF3 LOC107987238 LOC100129697 LOC105371414 LOC101927793 CDH15 LOC100289580 TRAPPC2L
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain CDT1 CBFA2T3 GALNS PABPN1L APRT LOC107987238 LOC101927793 TRAPPC2L PIEZO1
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CDT1 LOC400558 LINC00304 PABPN1L APRT LOC105371409 CBFA2T3 GALNS ACSF3 LOC107987238 LOC100129697 LOC101927793 CDH15 TRAPPC2L
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion CDT1 CBFA2T3 GALNS PABPN1L APRT LOC107987238 LOC100129697 LOC105371409 LOC101927793 TRAPPC2L
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LINC00304 PRDM7 LOC105371409 SLC22A31 TUBB8P7 CHMP1A TCF25 CBFA2T3 LOC105371419 VPS9D1 CPNE7 LOC101927793 MVD FANCA CENPBD1 LOC400558 LOC339059 PABPN1L APRT ANKRD11 RPL13 URAHP SNORD68 SNAI3-AS1 SPG7 ZNF778 GALNS SPATA2L CYBA ZNF276 LOC100289580 CDT1 MC1R GAS8 RNF166 CTU2 LOC107984817 PIEZO1 LOC100287036 IL17C CDK10 CDH15 LOC101927817 MIR4722 VPS9D1-AS1 GAS8-AS1 DEF8 TUBB3 SNAI3 AFG3L1P SPIRE2 FAM157C ACSF3 DPEP1 LOC107987238 LOC100129697 DBNDD1 LOC105371414 TRAPPC2L SPATA33
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain CBFA2T3 GALNS PABPN1L TRAPPC2L
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain CDT1 LOC339059 PABPN1L APRT CTU2 PIEZO1 CBFA2T3 GALNS LOC107987238 LOC101927793 LOC100289580 TRAPPC2L MIR4722

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