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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88887794 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03920324_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BE676580.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss APRT PIEZO1 CDT1 LOC105371409 LOC100129697 TRAPPC2L LOC107987238 LOC101927793 PABPN1L CBFA2T3 GALNS
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain CTU2 PIEZO1 CDT1 LOC105371409 ACSF3 LOC339059 LOC100129697 TRAPPC2L LOC400558 LOC107987238 LOC101927793 PABPN1L LINC00304 CDH15 APRT ZNF778 MIR4722 SLC22A31 CBFA2T3 GALNS LOC100289580
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion LOC101927793 PABPN1L CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss CDT1 LOC105371409 ACSF3 LOC100129697 TRAPPC2L LOC400558 LOC107987238 LOC101927793 PABPN1L LINC00304 CDH15 APRT SLC22A31 CBFA2T3 GALNS
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain PIEZO1 CDT1 LOC105371409 ACSF3 LOC339059 LOC100129697 TRAPPC2L LOC400558 LOC107987238 LOC100287036 LOC101927793 PABPN1L LINC00304 CDH15 APRT LOC105371414 ZNF778 ANKRD11 SLC22A31 CBFA2T3 GALNS LOC100289580
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain APRT PIEZO1 CDT1 TRAPPC2L LOC107987238 LOC101927793 PABPN1L CBFA2T3 GALNS
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CDT1 LOC105371409 ACSF3 LOC100129697 TRAPPC2L LOC400558 LOC107987238 LOC101927793 PABPN1L LINC00304 CDH15 APRT CBFA2T3 GALNS
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion APRT CDT1 LOC105371409 LOC100129697 TRAPPC2L LOC107987238 LOC101927793 PABPN1L CBFA2T3 GALNS
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC105371409 CHMP1A MVD TCF25 LOC107987238 PABPN1L DEF8 ZNF276 CDH15 APRT ZNF778 SPATA2L TUBB8P7 FAM157C VPS9D1-AS1 SLC22A31 LOC105371419 MC1R LOC100129697 TRAPPC2L LOC400558 LOC100287036 URAHP LINC00304 RPL13 LOC107984817 SNORD68 LOC105371414 DPEP1 MIR4722 PRDM7 LOC100289580 GAS8-AS1 CTU2 TUBB3 IL17C CPNE7 VPS9D1 SPATA33 ANKRD11 FANCA SNAI3-AS1 CBFA2T3 GALNS AFG3L1P GAS8 PIEZO1 CDT1 ACSF3 LOC101927817 LOC339059 SPIRE2 LOC101927793 SNAI3 CYBA RNF166 CENPBD1 DBNDD1 CDK10 SPG7
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain CTU2 PIEZO1 CDT1 LOC339059 TRAPPC2L LOC107987238 LOC101927793 PABPN1L APRT MIR4722 CBFA2T3 GALNS LOC100289580

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