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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88887794 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03920324_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BE676580.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss TRAPPC2L GALNS PIEZO1 CBFA2T3 LOC101927793 LOC105371409 CDT1 APRT LOC107987238 PABPN1L LOC100129697
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain GALNS PIEZO1 ACSF3 CTU2 SLC22A31 ZNF778 LOC400558 LOC107987238 PABPN1L LOC100129697 TRAPPC2L CBFA2T3 CDH15 LOC100289580 LOC101927793 LOC105371409 CDT1 APRT LINC00304 LOC339059 MIR4722
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion CBFA2T3 LOC101927793 PABPN1L
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss GALNS ACSF3 SLC22A31 LOC400558 LOC107987238 PABPN1L LOC100129697 TRAPPC2L CBFA2T3 CDH15 LOC101927793 LOC105371409 CDT1 APRT LINC00304
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain GALNS PIEZO1 ACSF3 SLC22A31 ZNF778 LOC400558 LOC107987238 PABPN1L LOC100129697 TRAPPC2L CBFA2T3 CDH15 LOC100289580 LOC101927793 LOC100287036 LOC105371409 CDT1 APRT ANKRD11 LINC00304 LOC339059 LOC105371414
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain TRAPPC2L GALNS PIEZO1 CBFA2T3 LOC101927793 CDT1 APRT LOC107987238 PABPN1L
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion TRAPPC2L GALNS CBFA2T3 LOC101927793 LOC105371409 CDT1 APRT LOC107987238 PABPN1L LOC100129697
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss GALNS ACSF3 LOC400558 LOC107987238 PABPN1L LOC100129697 TRAPPC2L CBFA2T3 CDH15 LOC101927793 LOC105371409 CDT1 APRT LINC00304
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss PIEZO1 GAS8-AS1 TUBB3 CTU2 VPS9D1-AS1 ZNF778 CYBA LOC400558 SPATA2L LOC107984817 LOC105371409 CHMP1A APRT LINC00304 GAS8 LOC105371414 MIR4722 SPG7 AFG3L1P LOC105371419 DEF8 ZNF276 IL17C LOC100129697 LOC100289580 LOC101927793 ANKRD11 RPL13 SNAI3-AS1 SPIRE2 GALNS URAHP CDK10 VPS9D1 DPEP1 SPATA33 LOC107987238 LOC101927817 CPNE7 TRAPPC2L CBFA2T3 PRDM7 CDT1 TUBB8P7 CENPBD1 LOC339059 MC1R ACSF3 FAM157C SLC22A31 FANCA PABPN1L SNORD68 CDH15 SNAI3 LOC100287036 DBNDD1 RNF166 MVD TCF25
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain GALNS PIEZO1 CTU2 LOC107987238 PABPN1L LOC100129697 TRAPPC2L CBFA2T3 LOC100289580 LOC101927793 LOC105371409 CDT1 APRT LOC339059 MIR4722

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