Hs03920927_cn

• Gene Symbol: PABPN1L
• Assay Reference Genome Location: Chr.16:88868139 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 390748
• Gene Name: poly(A) binding protein nuclear 1 like (cytoplasmic)
• Gene Aliases: PABPNL1, ePABP2
• Location: Chr.16:88862623-88870152 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PABPN1L	XM_017023230.1			XP_016878719.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv37n68	Chr.16:88767460 - 88944903 on Build GRCh38	Loss	LOC107987238 PABPN1L APRT TRAPPC2L LOC105371409 PIEZO1 CDT1 LOC101927793 CBFA2T3 GALNS LOC100129697
nsv1063024	Chr.16:88707330 - 89238482 on Build GRCh38	Gain	LOC100289580 ZNF778 LOC107987238 APRT TRAPPC2L ACSF3 PIEZO1 LOC101927793 LOC339059 LOC400558 LINC00304 PABPN1L MIR4722 LOC105371409 CDH15 CDT1 CBFA2T3 CTU2 SLC22A31 GALNS LOC100129697
nsv1928	Chr.16:88865211 - 88897277 on Build GRCh38	Insertion	PABPN1L LOC101927793 CBFA2T3
nsv471115	Chr.16:88801844 - 89197442 on Build GRCh38	Loss	LOC107987238 APRT TRAPPC2L ACSF3 LOC101927793 LOC400558 LINC00304 PABPN1L LOC105371409 CDH15 CDT1 CBFA2T3 SLC22A31 GALNS LOC100129697
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	LOC100289580 ZNF778 LOC107987238 APRT ANKRD11 TRAPPC2L ACSF3 PIEZO1 LOC101927793 LOC339059 LOC400558 LOC105371414 LINC00304 LOC100287036 PABPN1L LOC105371409 CDH15 CDT1 CBFA2T3 SLC22A31 GALNS LOC100129697
esv3639555	Chr.16:88745961 - 88899576 on Build GRCh38	Gain	LOC107987238 PABPN1L APRT TRAPPC2L PIEZO1 CDT1 LOC101927793 CBFA2T3 GALNS
nsv952071	Chr.16:88790893 - 89019992 on Build GRCh38	Deletion	LOC107987238 PABPN1L APRT TRAPPC2L LOC105371409 CDT1 LOC101927793 CBFA2T3 GALNS LOC100129697
nsv521217	Chr.16:88805821 - 89174375 on Build GRCh38	Loss	LOC107987238 APRT TRAPPC2L ACSF3 LOC101927793 LOC400558 LINC00304 PABPN1L LOC105371409 CDH15 CDT1 CBFA2T3 GALNS LOC100129697
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	MVD APRT ANKRD11 CYBA DBNDD1 GAS8 SPIRE2 ZNF276 SPATA33 LOC100289580 FAM157C LOC107987238 PRDM7 RNF166 SPG7 LOC339059 LOC400558 LINC00304 SPATA2L CDK10 LOC107984817 LOC105371409 CDH15 CDT1 SLC22A31 SNAI3-AS1 LOC100129697 MC1R VPS9D1-AS1 TCF25 TRAPPC2L PIEZO1 LOC101927817 CHMP1A LOC105371414 LOC100287036 AFG3L1P DEF8 MIR4722 CPNE7 GAS8-AS1 GALNS RPL13 ZNF778 TUBB3 ACSF3 LOC101927793 VPS9D1 DPEP1 CENPBD1 FANCA TUBB8P7 PABPN1L URAHP LOC105371419 IL17C CBFA2T3 SNAI3 CTU2 SNORD68
esv3639561	Chr.16:88837996 - 88882065 on Build GRCh38	Gain	PABPN1L TRAPPC2L CBFA2T3 GALNS
nsv1061256	Chr.16:88711587 - 89013365 on Build GRCh38	Gain	LOC100289580 LOC107987238 APRT TRAPPC2L PIEZO1 LOC101927793 LOC339059 PABPN1L MIR4722 LOC105371409 CDT1 CBFA2T3 CTU2 GALNS LOC100129697

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Function(s)

nucleotide binding
RNA binding