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See other TRAPPC2L CNV Assays ›
Gene Symbol
TRAPPC2L
Assay Reference Genome
Location

Chr.16:88857473 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03921468_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51693

Gene Name:

 trafficking protein particle complex 2-like

Gene Aliases:

 HSPC176

Location:

 Chr.16:88856220-88862686 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRAPPC2L NM_001318524.1 NP_001305453.1
NM_001318525.1 NP_001305454.1
NM_001318526.1 NP_001305455.1
NM_001318527.1 NP_001305456.1
NM_001318528.1 NP_001305457.1
NM_001318529.1 NP_001305458.1
NM_001318530.1 NP_001305459.1
NM_001318532.1 NP_001305461.1
NM_016209.4 NP_057293.1
NR_134670.1
NR_134671.1
XM_017023270.1 XP_016878759.1
AF089106.1 AAF00568.1
AF161524.1 AAF29139.1
AK126779.1 BAC86686.1
AK307253.1
AK310805.1
AK311885.1
AX771012.1 CAE01175.1
AX771013.1 CAE01176.1
AX771014.1 CAE01177.1
BC011369.1 AAH11369.1
BC018024.1 AAH18024.1
BC105809.1 AAI05810.1
BG283878.1
BI754306.1
BX340702.2
BX384775.2
BX419849.2
DA209193.1
DA293122.1
DA295904.1
DA833474.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss APRT LOC107987238 LOC100129697 CBFA2T3 CDT1 GALNS PABPN1L PIEZO1 LOC105371409 LOC101927793 TRAPPC2L
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain APRT ZNF778 CDT1 GALNS PABPN1L PIEZO1 SLC22A31 CTU2 LOC100289580 ACSF3 LOC339059 LINC00304 MIR4722 LOC107987238 LOC100129697 CDH15 CBFA2T3 LOC400558 LOC105371409 LOC101927793 TRAPPC2L
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss APRT CDT1 GALNS PABPN1L SLC22A31 ACSF3 LINC00304 LOC107987238 LOC100129697 CDH15 CBFA2T3 LOC400558 LOC105371409 LOC101927793 TRAPPC2L
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain APRT ANKRD11 ZNF778 CDT1 LOC105371414 GALNS PABPN1L PIEZO1 SLC22A31 LOC100289580 ACSF3 LOC339059 LINC00304 LOC100287036 LOC107987238 LOC100129697 CDH15 CBFA2T3 LOC400558 LOC105371409 LOC101927793 TRAPPC2L
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain APRT LOC107987238 CBFA2T3 CDT1 GALNS PABPN1L PIEZO1 LOC101927793 TRAPPC2L
nsv819907 Chr.16:88805821 - 88860813 on Build GRCh38 Gain APRT LOC107987238 CDT1 GALNS TRAPPC2L
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion APRT LOC107987238 LOC100129697 CBFA2T3 CDT1 GALNS PABPN1L LOC105371409 LOC101927793 TRAPPC2L
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss APRT ANKRD11 GAS8-AS1 CDT1 GALNS LOC105371419 CDK10 IL17C LOC100287036 LOC100129697 VPS9D1-AS1 FANCA VPS9D1 SPG7 RPL13 ZNF276 ZNF778 CENPBD1 SPATA33 LOC105371414 PIEZO1 DBNDD1 CTU2 LOC100289580 SPIRE2 SNAI3 MIR4722 MC1R SPATA2L TRAPPC2L MVD RNF166 URAHP SNAI3-AS1 PABPN1L SLC22A31 LOC101927817 ACSF3 LINC00304 SNORD68 LOC107984817 CDH15 CPNE7 PRDM7 GAS8 TCF25 CHMP1A DPEP1 CYBA AFG3L1P LOC339059 FAM157C LOC107987238 DEF8 TUBB3 CBFA2T3 TUBB8P7 LOC400558 LOC105371409 LOC101927793
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain CBFA2T3 GALNS PABPN1L TRAPPC2L
nsv1063441 Chr.16:88767066 - 88861882 on Build GRCh38 Loss APRT LOC107987238 CDT1 GALNS PIEZO1 TRAPPC2L
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain APRT CDT1 GALNS PABPN1L PIEZO1 CTU2 LOC100289580 LOC339059 MIR4722 LOC107987238 CBFA2T3 LOC101927793 TRAPPC2L

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

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