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See other SLC9A3R2 CNV Assays ›
Gene Symbol
SLC9A3R2
Assay Reference Genome
Location

Chr.16:2035115 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03921652_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9351

Gene Name:

 SLC9A3 regulator 2

Gene Aliases:

 E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1

Location:

 Chr.16:2026868-2039026 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3R2 NM_001130012.2 NP_001123484.1
NM_001252073.1 NP_001239002.1
NM_001252075.1 NP_001239004.1
NM_001252076.1 NP_001239005.1
NM_004785.5 NP_004776.3
XM_005255702.4 XP_005255759.1
XM_006720981.1 1 1451 XP_006721044.1
XM_017023894.1 XP_016879383.1
XM_017023895.1 XP_016879384.1
AF004900.1 AAC63061.1
AF035771.1 AAC52090.1
BC014513.1 AAH14513.2
BC069014.1 AAH69014.1
BC106001.1 AAI06002.1
BQ687174.1
BX377861.2
CB961565.1
DB495688.2
U82108.1 AAB53042.1
Z50150.1 CAA90511.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication IGFALS MIR1225 LOC652276 MIR3177 RPS2 NME3 EME2 NTHL1 RHBDL1 LOC100287175 SYNGR3 C1QTNF8 AXIN1 MIR6767 WDR24 TELO2 NOXO1 HBZ RPUSD1 MIR5587 TSR3 HBQ1 NDUFB10 JMJD8 SSTR5-AS1 HBM LMF1 RNF151 PRSS27 MIR3677 FAHD1 LOC105371184 ATP6V0C CAPN15 SNHG19 SOX8 PDPK1 GNPTG BAIAP3 RAB11FIP3 FAM234A SNORA78 CEMP1 C16orf91 SNRNP25 PKD1 MIR6859-4 NPW NTN3 FLJ42627 MSRB1 AMDHD2 PDIA2 LINC00254 STUB1 LOC107987233 TSC2 GFER ECI1 MIR3178 PRR25 HN1L SNORD60 LOC105371049 LOC106660606 TMEM204 TBL3 IFT140 TPSG1 NARFL NME4 LOC101929280 CRAMP1 RHOT2 MRPS34 UBE2I MRPL28 RAB26 UNKL CHTF18 TBC1D24 LOC105371038 WDR90 CCDC78 SLC9A3R2 ABCA3 C16orf59 MIR6511B1 PTX4 TRAF7 MLST8 TPSD1 RAB40C SNORA10 LOC105371047 CACNA1H HBA1 SPSB3 DNASE1L2 LOC100134368 PRSS29P LMF1-AS1 ZNF598 PRR35 PGP RPL23AP5 CCDC154 MIR4516 WFIKKN1 MIR4717 LOC107984876 ARHGDIG MPG MIR940 GNG13 LINC00235 MSLN NHLRC4 SNHG9 ERVK13-1 WASIR2 SSTR5 MEIOB CLCN7 DECR2 SNORA64 KCTD5 LOC105371046 HBA2 RPL3L METRN E4F1 HAGHL TPSB2 HAGH TMEM8A BRICD5 FAM173A PIGQ DDX11L10 NPRL3 POLR3K MCRIP2 ABCA17P CCNF RGS11 LOC729652 MIR3176 HS3ST6 FBXL16 CASKIN1 METTL26 LUC7L NUBP2 MAPK8IP3 TPSAB1 RHBDF1 MIR662 LOC105371045 MIR6768 RNPS1 MIR3180-5
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss TBL3 NPW NOXO1 ZNF598 SLC9A3R2 TSC2 GFER NTHL1 SYNGR3
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion LOC105371049 PKD1 MIR1225 TBL3 NPW RPS2 SNORA64 ZNF598 RPL3L SLC9A3R2 RNF151 NTHL1 MSRB1 MIR4516 MIR6511B1 SYNGR3 SNORA10 NOXO1 TSC2 GFER SNORA78 SNHG9 NDUFB10 HS3ST6
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss TBL3 NPW RPS2 SNORA64 ZNF598 SLC9A3R2 RNF151 SYNGR3 SNORA10 NOXO1 GFER SNORA78 SNHG9 NDUFB10
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion LOC105371049 PKD1 MIR1225 TBL3 NPW RPS2 SNORA64 ZNF598 SLC9A3R2 RNF151 NTHL1 MIR6511B1 SYNGR3 SNORA10 NOXO1 TSC2 GFER SNORA78 SNHG9 NDUFB10
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss TBL3 NPW NOXO1 ZNF598 SLC9A3R2 RNF151 GFER SNORA78 SNHG9 SYNGR3
nsv457348 Chr.16:2004154 - 2037561 on Build GRCh38 Loss NPW ZNF598 SLC9A3R2

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