Hs03922266_cn

• Gene Symbol: PABPN1L
• Assay Reference Genome Location: Chr.16:88869811 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 390748
• Gene Name: poly(A) binding protein nuclear 1 like (cytoplasmic)
• Gene Aliases: PABPNL1, ePABP2
• Location: Chr.16:88862623-88870152 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PABPN1L	XM_017023230.1	1	342	XP_016878719.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv37n68	Chr.16:88767460 - 88944903 on Build GRCh38	Loss	LOC101927793 CDT1 PABPN1L PIEZO1 GALNS CBFA2T3 LOC105371409 LOC107987238 TRAPPC2L APRT LOC100129697
nsv1063024	Chr.16:88707330 - 89238482 on Build GRCh38	Gain	LOC100289580 LOC339059 CDT1 PABPN1L PIEZO1 GALNS MIR4722 CBFA2T3 LOC105371409 LOC107987238 LOC400558 CTU2 LOC100129697 LOC101927793 ACSF3 SLC22A31 TRAPPC2L APRT ZNF778 LINC00304 CDH15
nsv1928	Chr.16:88865211 - 88897277 on Build GRCh38	Insertion	LOC101927793 PABPN1L CBFA2T3
nsv471115	Chr.16:88801844 - 89197442 on Build GRCh38	Loss	CDT1 PABPN1L GALNS CBFA2T3 LOC105371409 LOC107987238 LOC400558 LOC100129697 LOC101927793 ACSF3 SLC22A31 TRAPPC2L APRT LINC00304 CDH15
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	LOC100289580 LOC339059 LOC105371414 CDT1 PABPN1L PIEZO1 GALNS CBFA2T3 LOC105371409 LOC107987238 LOC400558 LOC100129697 LOC101927793 ACSF3 ANKRD11 LOC100287036 SLC22A31 TRAPPC2L APRT ZNF778 LINC00304 CDH15
esv3639555	Chr.16:88745961 - 88899576 on Build GRCh38	Gain	LOC101927793 CDT1 PABPN1L PIEZO1 GALNS CBFA2T3 LOC107987238 TRAPPC2L APRT
nsv521217	Chr.16:88805821 - 89174375 on Build GRCh38	Loss	CDT1 PABPN1L GALNS CBFA2T3 LOC105371409 LOC107987238 LOC400558 LOC100129697 LOC101927793 ACSF3 TRAPPC2L APRT LINC00304 CDH15
nsv952071	Chr.16:88790893 - 89019992 on Build GRCh38	Deletion	LOC101927793 CDT1 PABPN1L GALNS CBFA2T3 LOC105371409 LOC107987238 TRAPPC2L APRT LOC100129697
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	SPATA33 SPATA2L LOC105371414 ZNF276 DBNDD1 CYBA CBFA2T3 SPIRE2 LOC107984817 LOC100287036 CENPBD1 MVD SPG7 RPL13 IL17C SLC22A31 ZNF778 LINC00304 PABPN1L PIEZO1 CDK10 GALNS LOC400558 CTU2 LOC100129697 ACSF3 TUBB8P7 PRDM7 SNORD68 TRAPPC2L VPS9D1-AS1 DEF8 CDT1 GAS8-AS1 LOC105371419 SNAI3-AS1 SNAI3 LOC101927793 CPNE7 TUBB3 TCF25 APRT AFG3L1P LOC100289580 LOC339059 VPS9D1 MIR4722 LOC105371409 CHMP1A LOC107987238 MC1R URAHP DPEP1 LOC101927817 FAM157C ANKRD11 GAS8 RNF166 FANCA CDH15
esv3639561	Chr.16:88837996 - 88882065 on Build GRCh38	Gain	PABPN1L GALNS CBFA2T3 TRAPPC2L
dgv3065n100	Chr.16:88711587 - 88927172 on Build GRCh38	Gain	LOC100289580 LOC339059 CDT1 PABPN1L PIEZO1 GALNS MIR4722 CBFA2T3 LOC107987238 CTU2 LOC101927793 TRAPPC2L APRT

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Function(s)

nucleotide binding
RNA binding