Hs03922266_cn

• Gene Symbol: PABPN1L
• Assay Reference Genome Location: Chr.16:88869811 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 390748
• Gene Name: poly(A) binding protein nuclear 1 like (cytoplasmic)
• Gene Aliases: PABPNL1, ePABP2
• Location: Chr.16:88862623-88870152 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PABPN1L	XM_017023230.1	1	342	XP_016878719.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv37n68	Chr.16:88767460 - 88944903 on Build GRCh38	Loss	TRAPPC2L APRT CDT1 CBFA2T3 PABPN1L LOC105371409 LOC100129697 GALNS LOC107987238 PIEZO1 LOC101927793
nsv1063024	Chr.16:88707330 - 89238482 on Build GRCh38	Gain	APRT CBFA2T3 LOC339059 LOC100289580 LOC100129697 GALNS PIEZO1 SLC22A31 ZNF778 TRAPPC2L CDT1 MIR4722 CTU2 CDH15 LINC00304 PABPN1L ACSF3 LOC105371409 LOC400558 LOC107987238 LOC101927793
nsv1928	Chr.16:88865211 - 88897277 on Build GRCh38	Insertion	CBFA2T3 PABPN1L LOC101927793
nsv471115	Chr.16:88801844 - 89197442 on Build GRCh38	Loss	APRT CBFA2T3 LOC100129697 GALNS SLC22A31 TRAPPC2L CDT1 CDH15 LINC00304 PABPN1L ACSF3 LOC105371409 LOC400558 LOC107987238 LOC101927793
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	APRT CBFA2T3 LOC105371414 LOC339059 LOC100289580 LOC100129697 GALNS PIEZO1 LOC100287036 SLC22A31 ZNF778 TRAPPC2L CDT1 CDH15 LINC00304 PABPN1L ACSF3 LOC105371409 LOC400558 LOC107987238 ANKRD11 LOC101927793
esv3639555	Chr.16:88745961 - 88899576 on Build GRCh38	Gain	TRAPPC2L APRT CDT1 CBFA2T3 PABPN1L GALNS LOC107987238 PIEZO1 LOC101927793
nsv952071	Chr.16:88790893 - 89019992 on Build GRCh38	Deletion	TRAPPC2L APRT CDT1 CBFA2T3 PABPN1L LOC105371409 LOC100129697 GALNS LOC107987238 LOC101927793
nsv521217	Chr.16:88805821 - 89174375 on Build GRCh38	Loss	APRT CBFA2T3 LOC100129697 GALNS TRAPPC2L CDT1 CDH15 LINC00304 PABPN1L ACSF3 LOC105371409 LOC400558 LOC107987238 LOC101927793
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	LOC105371419 DBNDD1 SPATA33 GALNS SPATA2L PIEZO1 TRAPPC2L MVD VPS9D1-AS1 GAS8-AS1 CDH15 TUBB8P7 LOC101927793 GAS8 CBFA2T3 MC1R SNAI3-AS1 LOC339059 LOC100289580 SLC22A31 LOC107984817 CDK10 SPIRE2 FANCA TCF25 SPG7 RPL13 FAM157C LOC105371414 CPNE7 ZNF276 LOC100129697 IL17C LOC100287036 ZNF778 CYBA CDT1 CHMP1A AFG3L1P VPS9D1 SNORD68 PABPN1L DEF8 LOC400558 PRDM7 RNF166 APRT TUBB3 LOC101927817 DPEP1 MIR4722 CTU2 CENPBD1 SNAI3 LINC00304 ACSF3 LOC105371409 URAHP LOC107987238 ANKRD11
esv3639561	Chr.16:88837996 - 88882065 on Build GRCh38	Gain	TRAPPC2L CBFA2T3 PABPN1L GALNS
nsv1061256	Chr.16:88711587 - 89013365 on Build GRCh38	Gain	APRT CBFA2T3 LOC339059 LOC100289580 LOC100129697 GALNS PIEZO1 TRAPPC2L CDT1 MIR4722 CTU2 PABPN1L LOC105371409 LOC107987238 LOC101927793

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Function(s)

nucleotide binding
RNA binding