Hs03922964_cn

• Gene Symbol: LCMT1-AS1
• Assay Reference Genome Location: Chr.16:25106439 on build GRCh38
• Cytoband: 16p12.1

Target Gene Details

• Entrez Gene ID: 102723510
• Gene Name: LCMT1 antisense RNA 1
• Gene Aliases: -
• Location: Chr.16:25100564-25111555 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LCMT1-AS1	NR_120306.1
	AL600125.1
	BM790349.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3441	Chr.16:25054733 - 25126265 on Build GRCh38	Loss	LCMT1-AS1 LCMT1 LOC283887
dgv2827n100	Chr.16:25051972 - 25126693 on Build GRCh38	Gain	LCMT1-AS1 LCMT1 LOC283887
esv2758638	Chr.16:24932074 - 25175657 on Build GRCh38	Gain+Loss	LOC554206 LCMT1-AS2 LCMT1-AS1 ARHGAP17 LCMT1 LOC100421171 LOC283887
esv3638267	Chr.16:25097954 - 25119835 on Build GRCh38	Gain	LCMT1-AS1 LCMT1
esv2714121	Chr.16:25054771 - 25126057 on Build GRCh38	Deletion	LCMT1-AS1 LCMT1 LOC283887
dgv48e19	Chr.16:25054716 - 25128306 on Build GRCh38	Loss	LCMT1-AS1 LCMT1 LOC283887
esv2660591	Chr.16:25054775 - 25125976 on Build GRCh38	Deletion	LCMT1-AS1 LCMT1 LOC283887
esv34994	Chr.16:25057265 - 25125931 on Build GRCh38	Gain	LCMT1-AS1 LCMT1 LOC283887

More Information

Additional Information:

For this assay, SNP(s) [rs112106314] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation