Hs03926672_cn

• Gene Symbol: PABPN1L
• Assay Reference Genome Location: Chr.16:88863002 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 390748
• Gene Name: poly(A) binding protein nuclear 1 like (cytoplasmic)
• Gene Aliases: PABPNL1, ePABP2
• Location: Chr.16:88862623-88870152 on Build GRCh38
• Assay Gene Location: Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PABPN1L	XM_017023230.1	9	2900	XP_016878719.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv37n68	Chr.16:88767460 - 88944903 on Build GRCh38	Loss	LOC101927793 LOC107987238 GALNS PABPN1L PIEZO1 APRT LOC100129697 TRAPPC2L CDT1 CBFA2T3 LOC105371409
nsv1063024	Chr.16:88707330 - 89238482 on Build GRCh38	Gain	LOC101927793 GALNS LOC339059 PABPN1L PIEZO1 APRT LINC00304 TRAPPC2L CBFA2T3 LOC100289580 SLC22A31 LOC400558 CDH15 LOC107987238 MIR4722 ZNF778 ACSF3 LOC100129697 CDT1 LOC105371409 CTU2
esv2715064	Chr.16:88862976 - 88863420 on Build GRCh38	Deletion	PABPN1L
nsv471115	Chr.16:88801844 - 89197442 on Build GRCh38	Loss	LOC101927793 GALNS PABPN1L APRT LINC00304 TRAPPC2L CBFA2T3 SLC22A31 LOC400558 CDH15 LOC107987238 ACSF3 LOC100129697 CDT1 LOC105371409
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	LOC105371414 LOC101927793 GALNS LOC339059 PABPN1L PIEZO1 APRT LINC00304 TRAPPC2L CBFA2T3 LOC100289580 SLC22A31 LOC100287036 LOC400558 CDH15 LOC107987238 ANKRD11 ZNF778 ACSF3 LOC100129697 CDT1 LOC105371409
esv3639555	Chr.16:88745961 - 88899576 on Build GRCh38	Gain	LOC101927793 LOC107987238 GALNS PABPN1L PIEZO1 APRT TRAPPC2L CDT1 CBFA2T3
nsv521217	Chr.16:88805821 - 89174375 on Build GRCh38	Loss	LOC101927793 GALNS PABPN1L APRT LINC00304 TRAPPC2L CBFA2T3 LOC400558 CDH15 LOC107987238 ACSF3 LOC100129697 CDT1 LOC105371409
nsv952071	Chr.16:88790893 - 89019992 on Build GRCh38	Deletion	LOC101927793 LOC107987238 GALNS PABPN1L APRT LOC100129697 TRAPPC2L CDT1 CBFA2T3 LOC105371409
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	SNORD68 URAHP LINC00304 TRAPPC2L LOC100289580 CPNE7 TUBB8P7 SLC22A31 CDH15 ACSF3 LOC100129697 RNF166 CDK10 LOC105371419 LOC105371414 LOC101927793 GAS8-AS1 PABPN1L SPIRE2 FANCA DBNDD1 GAS8 RPL13 ANKRD11 MIR4722 CENPBD1 TCF25 VPS9D1 SPATA2L TUBB3 CYBA DEF8 GALNS LOC339059 CBFA2T3 SPATA33 LOC107984817 AFG3L1P ZNF778 IL17C FAM157C SNAI3-AS1 LOC105371409 SNAI3 PIEZO1 MVD APRT VPS9D1-AS1 SPG7 LOC100287036 LOC400558 PRDM7 MC1R DPEP1 LOC107987238 ZNF276 CHMP1A CDT1 LOC101927817 CTU2
esv3639561	Chr.16:88837996 - 88882065 on Build GRCh38	Gain	GALNS PABPN1L TRAPPC2L CBFA2T3
dgv3065n100	Chr.16:88711587 - 88927172 on Build GRCh38	Gain	LOC101927793 GALNS LOC339059 PABPN1L PIEZO1 APRT TRAPPC2L CBFA2T3 LOC100289580 LOC107987238 MIR4722 CDT1 CTU2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Function(s)

nucleotide binding
RNA binding