Hs03926672_cn

• Gene Symbol: PABPN1L
• Assay Reference Genome Location: Chr.16:88863002 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 390748
• Gene Name: poly(A) binding protein nuclear 1 like (cytoplasmic)
• Gene Aliases: PABPNL1, ePABP2
• Location: Chr.16:88862623-88870152 on Build GRCh38
• Assay Gene Location: Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PABPN1L	XM_017023230.1	9	2900	XP_016878719.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv37n68	Chr.16:88767460 - 88944903 on Build GRCh38	Loss	CDT1 LOC100129697 LOC107987238 GALNS LOC101927793 CBFA2T3 PIEZO1 LOC105371409 APRT PABPN1L TRAPPC2L
nsv1063024	Chr.16:88707330 - 89238482 on Build GRCh38	Gain	LOC100289580 LOC100129697 MIR4722 GALNS LOC400558 LOC101927793 PIEZO1 LOC105371409 CTU2 PABPN1L ZNF778 SLC22A31 LINC00304 LOC339059 CDT1 LOC107987238 CDH15 ACSF3 CBFA2T3 APRT TRAPPC2L
esv2715064	Chr.16:88862976 - 88863420 on Build GRCh38	Deletion	PABPN1L
nsv471115	Chr.16:88801844 - 89197442 on Build GRCh38	Loss	LOC100129697 GALNS LOC400558 LOC101927793 LOC105371409 PABPN1L SLC22A31 LINC00304 CDT1 LOC107987238 CDH15 ACSF3 CBFA2T3 APRT TRAPPC2L
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	LOC100289580 LOC100129697 GALNS ANKRD11 LOC400558 LOC101927793 PIEZO1 LOC105371414 LOC105371409 PABPN1L ZNF778 SLC22A31 LINC00304 LOC339059 CDT1 LOC107987238 CDH15 ACSF3 CBFA2T3 APRT TRAPPC2L LOC100287036
esv3639555	Chr.16:88745961 - 88899576 on Build GRCh38	Gain	CDT1 LOC107987238 GALNS LOC101927793 CBFA2T3 PIEZO1 APRT PABPN1L TRAPPC2L
nsv952071	Chr.16:88790893 - 89019992 on Build GRCh38	Deletion	CDT1 LOC100129697 LOC107987238 GALNS LOC101927793 CBFA2T3 LOC105371409 APRT PABPN1L TRAPPC2L
nsv521217	Chr.16:88805821 - 89174375 on Build GRCh38	Loss	LOC100129697 GALNS LOC400558 LOC101927793 LOC105371409 PABPN1L LINC00304 CDT1 LOC107987238 CDH15 ACSF3 CBFA2T3 APRT TRAPPC2L
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	TCF25 LOC100289580 MIR4722 CHMP1A ZNF276 FANCA ZNF778 LINC00304 LOC339059 CPNE7 SNAI3 SPIRE2 TRAPPC2L CDK10 CENPBD1 LOC100129697 MC1R TUBB8P7 ANKRD11 LOC400558 URAHP PIEZO1 SNAI3-AS1 PRDM7 SLC22A31 VPS9D1-AS1 CDT1 GAS8-AS1 CBFA2T3 TUBB3 AFG3L1P LOC101927817 APRT LOC101927793 RNF166 GAS8 VPS9D1 SNORD68 CYBA LOC100287036 GALNS SPATA2L LOC107984817 LOC105371414 LOC105371409 MVD RPL13 CTU2 PABPN1L FAM157C SPG7 DEF8 DBNDD1 LOC107987238 CDH15 IL17C ACSF3 LOC105371419 SPATA33 DPEP1
esv3639561	Chr.16:88837996 - 88882065 on Build GRCh38	Gain	GALNS CBFA2T3 PABPN1L TRAPPC2L
nsv1061256	Chr.16:88711587 - 89013365 on Build GRCh38	Gain	LOC100289580 LOC100129697 MIR4722 GALNS LOC101927793 PIEZO1 LOC105371409 CTU2 PABPN1L LOC339059 CDT1 LOC107987238 CBFA2T3 APRT TRAPPC2L

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Function(s)

nucleotide binding
RNA binding