Hs03927592_cn

• Gene Symbol: HS3ST6
• Assay Reference Genome Location: Chr.16:1919732 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 64711
• Gene Name: heparan sulfate-glucosamine 3-sulfotransferase 6
• Gene Aliases: 3-OST-6, HS3ST5
• Location: Chr.16:1911463-1921428 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HS3ST6	XM_011522608.2			XP_011520910.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	CRAMP1 SNHG19 KCTD5 RAB11FIP3 CEMP1 NTN3 ARHGDIG UNKL PKD1 NARFL LOC106660606 EME2 CASKIN1 ATP6V0C STUB1 RPL3L MPG SNORD60 HBZ TBC1D24 LMF1 RNF151 LOC107984876 MIR4516 RHBDF1 MSLN NPW LOC107987233 MIR3178 TRAF7 LMF1-AS1 TMEM204 LUC7L NUBP2 MIR6767 PIGQ MLST8 CACNA1H MIR3180-5 HBQ1 RNPS1 MIR3677 MSRB1 LOC100287175 CLCN7 LOC100134368 CCDC78 ABCA17P CCDC154 LOC105371049 ABCA3 MIR4717 LOC105371045 LOC101929280 RAB26 C1QTNF8 GNG13 UBE2I MIR3176 RAB40C BRICD5 ERVK13-1 MAPK8IP3 DDX11L10 ZNF598 HBA1 HAGHL MIR1225 FAHD1 PRR25 DNASE1L2 NDUFB10 PGP LOC105371047 RGS11 PDPK1 RPL23AP5 MEIOB CHTF18 HAGH TPSG1 E4F1 MRPS34 SNORA78 CAPN15 RHBDL1 MCRIP2 CCNF PRSS29P FAM173A LOC652276 METRN GFER TMEM8A FAM234A METTL26 NHLRC4 SSTR5 SLC9A3R2 GNPTG TPSAB1 BAIAP3 POLR3K PTX4 TSR3 TPSD1 NME4 SNORA10 FBXL16 NPRL3 SNHG9 SYNGR3 MIR3177 HBM C16orf91 LOC729652 MRPL28 RPS2 MIR6768 LINC00254 PDIA2 SSTR5-AS1 ECI1 WDR24 TSC2 JMJD8 WFIKKN1 LOC105371038 NOXO1 LINC00235 IFT140 HN1L WASIR2 TELO2 SPSB3 MIR5587 NME3 LOC105371046 MIR6511B1 MIR940 MIR6859-4 PRSS27 NTHL1 AXIN1 WDR90 RHOT2 SNRNP25 SOX8 DECR2 C16orf59 MIR662 FLJ42627 RPUSD1 HBA2 PRR35 TPSB2 IGFALS HS3ST6 AMDHD2 TBL3 SNORA64 LOC105371184
nsv952901	Chr.16:1888800 - 2135899 on Build GRCh38	Deletion	MSRB1 RNF151 MIR4516 TSC2 SNORA78 NPW SNORA10 NOXO1 SNHG9 SYNGR3 ZNF598 PKD1 MIR1225 LOC105371049 GFER HS3ST6 NDUFB10 SLC9A3R2 MIR6511B1 TBL3 RPL3L SNORA64 NTHL1 RPS2
nsv833120	Chr.16:1893102 - 1980660 on Build GRCh38	Loss	MSRB1 RNF151 HS3ST6 NDUFB10 SNORA78 SNORA10 TBL3 RPL3L NOXO1 SNORA64 SNHG9 RPS2
nsv519366	Chr.16:1851210 - 1961125 on Build GRCh38	Loss	MSRB1 HS3ST6 NDUFB10 MEIOB RPL3L LINC00254
nsv571178	Chr.16:1919082 - 1961125 on Build GRCh38	Loss	MSRB1 HS3ST6 NDUFB10 RPL3L

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Process(es)

glycosaminoglycan biosynthetic process

Function(s)

[heparan sulfate]-glucosamine 3-sulfotransferase 1 activity