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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88877817 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03934664_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 12 2528 XP_011521721.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK090985.1
AK097904.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss GALNS APRT LOC101927793 PIEZO1 PABPN1L LOC105371409 LOC107987238 TRAPPC2L CDT1 CBFA2T3 LOC100129697
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LINC00304 MIR4722 LOC101927793 PIEZO1 PABPN1L CBFA2T3 LOC100129697 CDH15 LOC400558 ACSF3 GALNS CTU2 LOC100289580 ZNF778 APRT SLC22A31 LOC105371409 LOC107987238 TRAPPC2L CDT1 LOC339059
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion LOC101927793 PABPN1L CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LINC00304 LOC101927793 PABPN1L CBFA2T3 LOC100129697 CDH15 LOC400558 ACSF3 GALNS APRT SLC22A31 LOC105371409 LOC107987238 TRAPPC2L CDT1
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LINC00304 LOC101927793 PIEZO1 ANKRD11 PABPN1L CBFA2T3 LOC100129697 CDH15 LOC105371414 LOC400558 ACSF3 GALNS LOC100289580 ZNF778 APRT SLC22A31 LOC100287036 LOC105371409 LOC107987238 TRAPPC2L CDT1 LOC339059
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain GALNS APRT LOC101927793 PIEZO1 PABPN1L LOC107987238 TRAPPC2L CDT1 CBFA2T3
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion GALNS APRT LOC101927793 PABPN1L LOC105371409 LOC107987238 TRAPPC2L CDT1 CBFA2T3 LOC100129697
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LINC00304 LOC101927793 PABPN1L CBFA2T3 LOC100129697 CDH15 LOC400558 ACSF3 GALNS APRT LOC105371409 LOC107987238 TRAPPC2L CDT1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SNAI3-AS1 SPIRE2 ZNF276 LOC105371419 CYBA LOC100129697 CDH15 FAM157C GALNS IL17C TCF25 LOC101927817 AFG3L1P CDT1 PRDM7 URAHP MC1R TUBB3 SNORD68 SPATA2L LOC105371414 LOC400558 DBNDD1 TUBB8P7 LOC107987238 TRAPPC2L CHMP1A SPG7 VPS9D1 FANCA SPATA33 PIEZO1 PABPN1L RPL13 ACSF3 CTU2 ZNF778 VPS9D1-AS1 SLC22A31 LOC105371409 GAS8 CDK10 DEF8 MVD LINC00304 MIR4722 CPNE7 LOC101927793 ANKRD11 CBFA2T3 DPEP1 RNF166 LOC107984817 LOC100289580 SNAI3 GAS8-AS1 APRT CENPBD1 LOC100287036 LOC339059
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain GALNS PABPN1L TRAPPC2L CBFA2T3
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain MIR4722 LOC101927793 PIEZO1 PABPN1L CBFA2T3 LOC100129697 GALNS CTU2 LOC100289580 APRT LOC105371409 LOC107987238 TRAPPC2L CDT1 LOC339059

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