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See other CHTF18 CNV Assays ›
Gene Symbol
CHTF18
Assay Reference Genome
Location

Chr.16:790705 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03936043_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 63922

Gene Name:

 chromosome transmission fidelity factor 18

Gene Aliases:

 C16orf41, C321D2.2, C321D2.3, C321D2.4, CHL12, Ctf18, RUVBL

Location:

 Chr.16:788622-798074 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 6 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHTF18 NM_022092.2 NP_071375.1
XM_005255470.1 XP_005255527.1
XM_005255471.3 XP_005255528.1
XM_011522572.1 XP_011520874.1
XM_017023532.1 XP_016879021.1
XM_017023533.1 XP_016879022.1
XM_017023534.1 XP_016879023.1
AK024476.1 7 1153 BAB15766.1
AK128869.1 6 736
AK293846.1 7 1010
AK309804.1
BC006278.2 AAH06278.2
BC006437.1 AAH06437.1
BC018184.1 AAH18184.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4828n54 Chr.16:760143 - 828324 on Build GRCh38 Gain MIR662 RPUSD1 MSLN GNG13 PRR25 CHTF18
esv3637582 Chr.16:751057 - 851536 on Build GRCh38 Gain MIR662 RPUSD1 MSLN GNG13 PRR25 CHTF18
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR6768 IFT140 RPUSD1 TMEM204 CASKIN1 CRAMP1 HBQ1 PRR35 MIR3180-5 MIR5587 TMEM8A HN1L HBZ LUC7L MIR6511B1 TBC1D24 FAHD1 ATP6V0C RAB40C MIR662 PDIA2 CLCN7 PGP TSC2 ZNF598 LOC105371038 RHOT2 RPS2 HS3ST6 C1QTNF8 LINC00254 LOC652276 MIR6767 MIR3176 NME3 MIR3677 CEMP1 GFER MEIOB AMDHD2 FLJ42627 ABCA3 MIR4717 PIGQ MIR940 STUB1 LOC107984876 NPW LOC100287175 NDUFB10 SNHG19 MPG SLC9A3R2 UNKL SYNGR3 MIR1225 LOC105371045 GNPTG MCRIP2 DNASE1L2 NOXO1 MRPS34 SNRNP25 WDR24 HAGH TPSD1 TSR3 LOC106660606 IGFALS SNORA64 CAPN15 SPSB3 NPRL3 MRPL28 MLST8 METRN RAB11FIP3 ERVK13-1 TELO2 SNORD60 JMJD8 RPL3L SSTR5-AS1 MIR3177 NHLRC4 METTL26 TRAF7 MSLN RAB26 GNG13 LOC107987233 PRR25 CCDC154 ARHGDIG TPSAB1 RHBDF1 FBXL16 LOC729652 RNPS1 LOC105371049 NTN3 PTX4 ABCA17P TBL3 SNORA10 RNF151 BAIAP3 PKD1 SOX8 FAM173A WASIR2 MIR4516 NARFL DECR2 SSTR5 WDR90 TPSB2 UBE2I RPL23AP5 LOC105371046 RHBDL1 MIR6859-4 LMF1 HBM E4F1 NUBP2 PRSS29P MIR3178 AXIN1 RGS11 KCTD5 CCDC78 MSRB1 BRICD5 WFIKKN1 NTHL1 HAGHL LOC105371184 POLR3K CACNA1H MAPK8IP3 LINC00235 C16orf59 LOC100134368 FAM234A HBA1 C16orf91 TPSG1 SNORA78 HBA2 PRSS27 DDX11L10 EME2 ECI1 CHTF18 LMF1-AS1 PDPK1 SNHG9 NME4 CCNF LOC101929280 LOC105371047
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss PIGQ RPUSD1 MSLN GNG13 STUB1 CCDC78 LOC107987233 PRR25 PRR35 LOC100287175 WFIKKN1 HAGHL LOC105371184 MIR5587 MCRIP2 LINC00235 FBXL16 RAB40C WDR24 MIR662 FAM173A LOC105371038 RHOT2 CAPN15 CHTF18 METRN RAB11FIP3 NARFL MIR3176 WDR90 JMJD8 LOC101929280 RHBDL1 NHLRC4 METTL26
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss PIGQ RPUSD1 MSLN GNG13 STUB1 CCDC78 LOC107987233 PRR25 PRR35 LOC100287175 WFIKKN1 HAGHL LOC105371184 MIR5587 MCRIP2 LINC00235 FBXL16 RAB40C WDR24 MIR662 FAM173A LOC105371038 RHOT2 CAPN15 CHTF18 METRN RAB11FIP3 NARFL MIR3176 WDR90 JMJD8 LOC101929280 RHBDL1 NHLRC4 METTL26
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LMF1 PIGQ RPUSD1 MSLN GNG13 STUB1 LOC107984876 CCDC78 LOC107987233 PRR25 PRR35 LOC100287175 WFIKKN1 HAGHL LOC105371184 MIR5587 MCRIP2 LINC00235 FBXL16 RAB40C WDR24 MIR662 SOX8 FAM173A LOC105371038 RHOT2 CAPN15 CHTF18 C1QTNF8 LMF1-AS1 METRN RAB11FIP3 NARFL MIR3176 SSTR5 WDR90 JMJD8 SSTR5-AS1 LOC101929280 RHBDL1 NHLRC4 METTL26
nsv571042 Chr.16:785298 - 847566 on Build GRCh38 Loss RPUSD1 GNG13 PRR25 CHTF18
nsv571044 Chr.16:790409 - 796798 on Build GRCh38 Loss CHTF18
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication PIGQ RPUSD1 MSLN GNG13 STUB1 CCDC78 LOC100287175 WFIKKN1 HAGHL LOC105371184 MCRIP2 FBXL16 RAB40C WDR24 MIR662 FAM173A LOC105371038 RHOT2 CHTF18 METRN NARFL WDR90 JMJD8 LOC101929280 RHBDL1 METTL26
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication PIGQ RPUSD1 MSLN GNG13 STUB1 CCDC78 LOC107987233 PRR25 PRR35 LOC100287175 WFIKKN1 HAGHL LOC105371184 MIR5587 MCRIP2 LINC00235 FBXL16 RAB40C WDR24 MIR662 FAM173A LOC105371038 RHOT2 CAPN15 CHTF18 METRN RAB11FIP3 NARFL MIR3176 WDR90 JMJD8 LOC101929280 RHBDL1 NHLRC4 METTL26
nsv571043 Chr.16:787857 - 798755 on Build GRCh38 Loss RPUSD1 GNG13 CHTF18
nsv817712 Chr.16:774098 - 810673 on Build GRCh38 Loss RPUSD1 GNG13 PRR25 CHTF18
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss WDR24 MIR662 RPUSD1 FAM173A MSLN GNG13 STUB1 LOC105371038 RHOT2 CCDC78 LOC100287175 CHTF18 HAGHL LOC105371184 METRN NARFL MCRIP2 FBXL16 WDR90 JMJD8 RHBDL1
nsv571045 Chr.16:790597 - 847566 on Build GRCh38 Gain GNG13 PRR25 CHTF18
nsv457312 Chr.16:760039 - 797743 on Build GRCh38 Loss MIR662 RPUSD1 MSLN CHTF18

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