Hs03937432_cn

• Gene Symbol: NUBP2
• Assay Reference Genome Location: Chr.16:1785368 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 10101
• Gene Name: nucleotide binding protein 2
• Gene Aliases: CFD1, NBP 2, NUBP1
• Location: Chr.16:1782923-1789191 on Build GRCh38
• Assay Gene Location: Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NUBP2	NM_001284501.1			NP_001271430.1
	NM_001284502.1			NP_001271431.1
	NM_012225.3			NP_036357.1
	NR_104318.1
	XM_005255027.2	1	47	XP_005255084.1
	XM_005255030.1			XP_005255087.1
	XM_011522338.2			XP_011520640.1
	XM_017022831.1			XP_016878320.1
	XM_017022832.1	1	47	XP_016878321.1
	AF118394.1			AAD45242.1
	AK001023.1			BAA91471.1
	AK093593.1
	AK124460.1	1	658
	AK300696.1
	AK315611.1
	BC002768.2			AAH02768.1
	BC008005.1			AAH08005.1
	BI196883.1
	BU189242.1
	BX446436.2
	BX648907.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv457335	Chr.16:1729694 - 1789022 on Build GRCh38	Loss	SPSB3 MAPK8IP3 MRPS34 NME3 EME2 NUBP2 MIR3177
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	PIGQ MIR4516 MIR3178 TPSAB1 TPSD1 METRN TSR3 LOC105371038 RNPS1 SNORD60 MIR1225 IGFALS MAPK8IP3 MIR6768 MRPS34 TMEM8A LINC00254 HBQ1 NPRL3 SNHG9 KCTD5 PKD1 ECI1 WDR90 MIR3180-5 MIR5587 MIR3177 NTN3 SLC9A3R2 NDUFB10 RPL23AP5 RAB26 SSTR5-AS1 EME2 WFIKKN1 E4F1 LOC105371046 TBL3 HBZ PDIA2 FAM234A RNF151 CASKIN1 AMDHD2 ZNF598 FBXL16 SSTR5 IFT140 RPL3L RAB40C MIR6859-4 MPG NOXO1 MLST8 TPSB2 TBC1D24 UBE2I ERVK13-1 LOC105371047 CHTF18 SNORA78 SNHG19 NME3 TPSG1 TRAF7 MSLN PRSS27 LOC107984876 CEMP1 FLJ42627 MIR940 CACNA1H MIR662 WASIR2 MEIOB LOC100287175 DNASE1L2 UNKL PGP BRICD5 LOC106660606 RHBDL1 LOC652276 C16orf59 LOC105371045 RGS11 HBM MIR3677 MIR6767 DECR2 MSRB1 HAGHL CCDC78 ABCA17P LINC00235 LOC100134368 SPSB3 MIR4717 NARFL FAM173A LOC105371049 TSC2 POLR3K RAB11FIP3 WDR24 SYNGR3 LMF1 SNORA10 NHLRC4 ABCA3 STUB1 CAPN15 LUC7L HS3ST6 CCNF TELO2 NUBP2 SNRNP25 ATP6V0C RPUSD1 HN1L HAGH LMF1-AS1 GFER ARHGDIG SOX8 LOC729652 RHBDF1 C1QTNF8 MIR3176 DDX11L10 CCDC154 PRR35 JMJD8 PRSS29P MRPL28 NTHL1 NPW LOC107987233 MCRIP2 BAIAP3 AXIN1 GNPTG TMEM204 HBA2 C16orf91 RHOT2 MIR6511B1 CRAMP1 GNG13 LOC101929280 CLCN7 METTL26 HBA1 FAHD1 SNORA64 PTX4 PDPK1 LOC105371184 PRR25 NME4 RPS2
nsv571172	Chr.16:1764390 - 1817039 on Build GRCh38	Loss	SPSB3 HAGH IGFALS MAPK8IP3 MRPS34 NME3 EME2 NUBP2
nsv1160328	Chr.16:1704619 - 1797867 on Build GRCh38	Deletion	SPSB3 IGFALS MAPK8IP3 MRPS34 NME3 EME2 NUBP2 MIR3177
nsv571171	Chr.16:1757779 - 1804539 on Build GRCh38	Gain+Loss	SPSB3 IGFALS MAPK8IP3 MRPS34 NME3 EME2 NUBP2
nsv1042986	Chr.16:1784723 - 1866102 on Build GRCh38	Loss	FAHD1 HAGH IGFALS MEIOB NUBP2
dgv4856n54	Chr.16:1600945 - 1813519 on Build GRCh38	Loss	LOC105371046 HN1L SPSB3 HAGH NME3 CRAMP1 MIR3177 IFT140 IGFALS MAPK8IP3 MRPS34 EME2 NUBP2
nsv471069	Chr.16:1754356 - 1791032 on Build GRCh38	Loss	SPSB3 IGFALS MAPK8IP3 MRPS34 NME3 EME2 NUBP2
nsv1051692	Chr.16:1505070 - 1866102 on Build GRCh38	Loss	LOC105371046 HN1L SPSB3 LOC105371047 HAGH TMEM204 NME3 CRAMP1 MIR3177 IFT140 FAHD1 IGFALS MAPK8IP3 MEIOB MRPS34 TELO2 EME2 NUBP2
nsv827500	Chr.16:1761258 - 1795126 on Build GRCh38	Gain	SPSB3 IGFALS MAPK8IP3 MRPS34 NME3 EME2 NUBP2
nsv518641	Chr.16:1645775 - 1835631 on Build GRCh38	Loss	HN1L SPSB3 HAGH NME3 CRAMP1 MIR3177 FAHD1 IGFALS MAPK8IP3 MEIOB MRPS34 EME2 NUBP2
nsv952900	Chr.16:1724500 - 1827999 on Build GRCh38	Deletion	SPSB3 FAHD1 HAGH IGFALS MAPK8IP3 MRPS34 NME3 EME2 NUBP2 MIR3177
nsv571170	Chr.16:1752231 - 1791032 on Build GRCh38	Loss	SPSB3 IGFALS MAPK8IP3 MRPS34 NME3 EME2 NUBP2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

iron-sulfur cluster assembly
cell projection organization

Function(s)

nucleotide binding
protein binding
ATP binding
metal ion binding
4 iron, 4 sulfur cluster binding