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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88890539 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03937478_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BE676580.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss CBFA2T3 LOC105371409 APRT GALNS LOC101927793 LOC100129697 TRAPPC2L LOC107987238 PIEZO1 CDT1 PABPN1L
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain CDH15 SLC22A31 CBFA2T3 LOC105371409 LOC101927793 ZNF778 PABPN1L MIR4722 ACSF3 APRT LOC100289580 GALNS LOC400558 CTU2 LOC100129697 LOC339059 TRAPPC2L LOC107987238 LINC00304 PIEZO1 CDT1
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion CBFA2T3 LOC101927793 PABPN1L
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss CDH15 SLC22A31 CBFA2T3 LOC105371409 LOC101927793 PABPN1L ACSF3 APRT GALNS LOC400558 LOC100129697 TRAPPC2L LOC107987238 LINC00304 CDT1
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain CDH15 SLC22A31 CBFA2T3 LOC105371409 LOC101927793 ZNF778 ANKRD11 LOC105371414 PABPN1L ACSF3 APRT LOC100289580 GALNS LOC400558 LOC100287036 LOC100129697 LOC339059 TRAPPC2L LOC107987238 LINC00304 PIEZO1 CDT1
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain CBFA2T3 APRT GALNS LOC101927793 TRAPPC2L LOC107987238 PIEZO1 CDT1 PABPN1L
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CDH15 CBFA2T3 LOC105371409 LOC101927793 PABPN1L ACSF3 APRT GALNS LOC400558 LOC100129697 TRAPPC2L LOC107987238 LINC00304 CDT1
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion CBFA2T3 LOC105371409 APRT GALNS LOC101927793 LOC100129697 TRAPPC2L LOC107987238 CDT1 PABPN1L
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss CDH15 VPS9D1-AS1 LOC105371409 LOC101927793 RPL13 DPEP1 LOC107984817 LOC101927817 LOC400558 CTU2 SPATA33 PRDM7 IL17C CPNE7 SNORD68 TCF25 LOC105371414 PABPN1L AFG3L1P ACSF3 LOC100289580 GAS8-AS1 DEF8 LOC339059 GAS8 TUBB8P7 ZNF276 VPS9D1 SLC22A31 MC1R FANCA SNAI3 CHMP1A ZNF778 SNAI3-AS1 CENPBD1 ANKRD11 CDK10 LOC105371419 SPATA2L FAM157C MIR4722 SPIRE2 APRT TUBB3 GALNS LOC100287036 LOC107987238 RNF166 LINC00304 PIEZO1 CDT1 CBFA2T3 DBNDD1 URAHP MVD SPG7 LOC100129697 TRAPPC2L CYBA
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain CBFA2T3 LOC101927793 PABPN1L MIR4722 APRT LOC100289580 GALNS CTU2 LOC339059 TRAPPC2L LOC107987238 PIEZO1 CDT1

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