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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88890539 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03937478_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BE676580.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss APRT CBFA2T3 GALNS PIEZO1 LOC107987238 LOC101927793 PABPN1L CDT1 TRAPPC2L LOC100129697 LOC105371409
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain GALNS ZNF778 LOC101927793 LINC00304 ACSF3 SLC22A31 APRT CBFA2T3 PIEZO1 LOC400558 LOC107987238 PABPN1L LOC339059 CDT1 LOC100289580 CDH15 TRAPPC2L LOC100129697 CTU2 MIR4722 LOC105371409
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion CBFA2T3 LOC101927793 PABPN1L
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss GALNS LOC101927793 LINC00304 ACSF3 SLC22A31 APRT CBFA2T3 LOC400558 LOC107987238 PABPN1L CDT1 CDH15 TRAPPC2L LOC100129697 LOC105371409
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain GALNS ZNF778 LOC101927793 ANKRD11 LINC00304 ACSF3 SLC22A31 APRT CBFA2T3 PIEZO1 LOC400558 LOC100287036 LOC107987238 PABPN1L LOC339059 CDT1 LOC100289580 CDH15 TRAPPC2L LOC100129697 LOC105371409 LOC105371414
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain APRT CBFA2T3 GALNS PIEZO1 LOC107987238 LOC101927793 PABPN1L CDT1 TRAPPC2L
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion APRT CBFA2T3 GALNS LOC107987238 LOC101927793 PABPN1L CDT1 TRAPPC2L LOC100129697 LOC105371409
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss GALNS LOC101927793 LINC00304 ACSF3 APRT CBFA2T3 LOC400558 LOC107987238 PABPN1L CDT1 CDH15 TRAPPC2L LOC100129697 LOC105371409
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss MC1R SLC22A31 CBFA2T3 PIEZO1 URAHP SNAI3 CDT1 SPIRE2 CDH15 CHMP1A SNAI3-AS1 SPG7 ZNF778 FAM157C LOC101927793 DPEP1 CENPBD1 SPATA33 RNF166 LOC100289580 TRAPPC2L LOC100129697 MIR4722 DEF8 LOC105371419 TUBB8P7 LOC107984817 TUBB3 RPL13 MVD LOC101927817 CYBA ZNF276 LINC00304 PRDM7 GAS8 CDK10 LOC400558 LOC339059 FANCA TCF25 GAS8-AS1 GALNS DBNDD1 AFG3L1P ANKRD11 ACSF3 SNORD68 APRT VPS9D1 IL17C LOC100287036 LOC107987238 PABPN1L CPNE7 SPATA2L VPS9D1-AS1 CTU2 LOC105371409 LOC105371414
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain GALNS LOC101927793 APRT CBFA2T3 PIEZO1 LOC107987238 PABPN1L LOC339059 CDT1 LOC100289580 TRAPPC2L LOC100129697 CTU2 MIR4722 LOC105371409

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