Hs03940756_cn

• Gene Symbol: GLYR1
• Assay Reference Genome Location: Chr.16:4818912 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 84656
• Gene Name: glyoxylate reductase 1 homolog
• Gene Aliases: BM045, HIBDL, N-PAC, NP60
• Location: Chr.16:4803203-4847388 on Build GRCh38
• Assay Gene Location: Within Intron 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GLYR1	NM_001308096.1			NP_001295025.1
	NM_001324096.1			NP_001311025.1
	NM_001324097.1			NP_001311026.1
	NM_001324098.1			NP_001311027.1
	NM_032569.3			NP_115958.2
	NR_136695.1
	NR_136696.1
	NR_136697.1
	NR_136698.1
	NR_136699.1
	NR_136700.1
	XM_005255639.4			XP_005255696.2
	XM_011522716.2			XP_011521018.1
	XM_011522717.1			XP_011521019.1
	XM_017023786.1			XP_016879275.1
	XM_017023787.1			XP_016879276.1
	XM_017023788.1			XP_016879277.1
	XM_017023789.1			XP_016879278.1
	AF244907.1			AAQ14242.1
	AF326966.1			AAK15524.1
	AK296842.1
	AK307834.1
	AY352585.1			AAQ57265.1
	BC003693.1			AAH03693.1
	BC032855.1			AAH32855.1
	BC047223.1			AAH47223.1
	BC064940.1			AAH64940.1
	CR933687.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv26756	Chr.16:4772529 - 4855231 on Build GRCh38	Gain+Loss	SEPT12 SMIM22 UBN1 GLYR1 ROGDI
esv2422516	Chr.16:4775920 - 5160979 on Build GRCh38	Deletion	SEPT12 NAGPA-AS1 SMIM22 PPL C16orf89 ALG1 UBN1 EEF2KMT SEC14L5 NAGPA GLYR1 ROGDI
nsv1046986	Chr.16:4049000 - 5555721 on Build GRCh38	Gain	HMOX2 CORO7-PAM16 LOC105371063 MIR6769A EEF2KMT GLIS2 SEPT12 NAGPA-AS1 LINC01569 VASN ALG1 UBN1 GLYR1 ANKS3 C16orf96 MGRN1 ADCY9 PAM16 SMIM22 TFAP4 PPL RBFOX1 DNAJA3 C16orf71 C16orf89 GLIS2-AS1 CDIP1 SEC14L5 SRL NAGPA UBALD1 NUDT16L1 ZNF500 ROGDI CORO7 NMRAL1

More Information

Additional Information:

For this assay, SNP(s) [rs73515173] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

oxidoreductase

Gene Ontology Categories:

Process(es)

oxidation-reduction process

Function(s)

DNA binding
phosphogluconate dehydrogenase (decarboxylating) activity
protein binding
methylated histone binding
NAD binding