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See other SPSB3 CNV Assays ›
Gene Symbol
SPSB3
Assay Reference Genome
Location

Chr.16:1779727 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03942411_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 90864

Gene Name:

 splA/ryanodine receptor domain and SOCS box containing 3

Gene Aliases:

 C16orf31, SSB3

Location:

 Chr.16:1776712-1782605 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPSB3 NM_001324081.1 NP_001311010.1
NM_080861.3 NP_543137.2
XM_005255673.4 XP_005255730.1
AF403028.1 AAL57347.1
AK074190.1
AK302041.1
BC007588.1
BC024244.1 AAH24244.1
BC041897.1 AAH41897.1
BC047441.1
BI768095.1
BM836743.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv457335 Chr.16:1729694 - 1789022 on Build GRCh38 Loss NUBP2 MAPK8IP3 NME3 SPSB3 MRPS34 MIR3177 EME2
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RAB40C MEIOB CCDC154 UNKL SNORA10 LOC105371045 PDIA2 TBL3 RPL3L MSLN HBA1 FBXL16 MIR6859-4 TMEM204 PRSS27 CLCN7 SYNGR3 HAGH WDR90 MIR6767 NPW FAM234A AMDHD2 KCTD5 LMF1 LOC107987233 NUBP2 LOC105371047 ZNF598 GFER MIR3178 LOC106660606 HBA2 SNRNP25 HBQ1 C1QTNF8 MIR3176 TMEM8A MLST8 TBC1D24 BRICD5 C16orf91 LUC7L LMF1-AS1 RHBDF1 GNPTG TSC2 ATP6V0C MIR940 DECR2 GNG13 CCDC78 METRN POLR3K SSTR5 SNORA64 SNHG9 LOC100287175 MIR4717 NOXO1 NME4 RAB26 C16orf59 ARHGDIG RPUSD1 CCNF E4F1 PRR25 RAB11FIP3 FAM173A MRPS34 MIR6511B1 HBZ MSRB1 WFIKKN1 MIR3677 SOX8 LOC100134368 SPSB3 CEMP1 MRPL28 JMJD8 IGFALS CHTF18 HAGHL TPSAB1 SNORD60 ABCA17P FAHD1 LOC101929280 TRAF7 CASKIN1 PRR35 WASIR2 TPSG1 MIR6768 PDPK1 DDX11L10 AXIN1 LOC729652 RGS11 MPG CACNA1H LOC107984876 SLC9A3R2 PGP PTX4 CRAMP1 SSTR5-AS1 MAPK8IP3 TPSB2 NPRL3 NME3 WDR24 FLJ42627 LOC105371046 ERVK13-1 METTL26 NTN3 RNPS1 PKD1 CAPN15 IFT140 NDUFB10 MIR3180-5 NTHL1 MIR4516 LOC105371038 PIGQ LINC00254 RPL23AP5 LINC00235 UBE2I HBM ECI1 RHOT2 HN1L SNORA78 MIR3177 STUB1 EME2 HS3ST6 MIR5587 MIR662 MIR1225 BAIAP3 TELO2 RNF151 RPS2 LOC652276 LOC105371049 DNASE1L2 MCRIP2 NARFL LOC105371184 SNHG19 NHLRC4 PRSS29P ABCA3 RHBDL1 TSR3 TPSD1
esv3892756 Chr.16:1764390 - 1780436 on Build GRCh38 Loss MAPK8IP3 NME3 SPSB3 MRPS34 EME2
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion NUBP2 MAPK8IP3 NME3 SPSB3 IGFALS MRPS34 MIR3177 EME2
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss NUBP2 MAPK8IP3 NME3 SPSB3 IGFALS MRPS34 EME2
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss IFT140 SPSB3 IGFALS CRAMP1 NUBP2 MAPK8IP3 NME3 LOC105371046 MRPS34 HN1L MIR3177 HAGH EME2
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss NUBP2 MAPK8IP3 NME3 SPSB3 IGFALS MRPS34 EME2
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss IFT140 MEIOB TELO2 SPSB3 IGFALS FAHD1 CRAMP1 NUBP2 LOC105371047 MAPK8IP3 TMEM204 NME3 LOC105371046 MRPS34 HN1L MIR3177 HAGH EME2
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain NUBP2 MAPK8IP3 NME3 SPSB3 IGFALS MRPS34 EME2
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss MEIOB SPSB3 IGFALS FAHD1 CRAMP1 NUBP2 MAPK8IP3 NME3 MRPS34 HN1L MIR3177 HAGH EME2
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss MAPK8IP3 NME3 SPSB3 MRPS34 EME2
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion FAHD1 NUBP2 MAPK8IP3 NME3 SPSB3 IGFALS MRPS34 MIR3177 HAGH EME2
nsv571170 Chr.16:1752231 - 1791032 on Build GRCh38 Loss NUBP2 MAPK8IP3 NME3 SPSB3 IGFALS MRPS34 EME2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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