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See other PABPN1L CNV Assays ›
Gene Symbol
PABPN1L
Assay Reference Genome
Location

Chr.16:88863804 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03945699_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 390748

Gene Name:

 poly(A) binding protein nuclear 1 like (cytoplasmic)

Gene Aliases:

 PABPNL1, ePABP2

Location:

 Chr.16:88862623-88870152 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PABPN1L NM_001080487.2 NP_001073956.2
NM_001294328.1 NP_001281257.1
XM_017023230.1 XP_016878719.1
BC130001.1
BC130002.1
EU190484.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss CBFA2T3 CDT1 TRAPPC2L LOC101927793 LOC100129697 LOC105371409 GALNS APRT LOC107987238 PIEZO1 PABPN1L
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain CBFA2T3 LOC100289580 CDT1 LOC400558 TRAPPC2L MIR4722 CDH15 ZNF778 ACSF3 LOC100129697 LOC105371409 GALNS APRT LOC107987238 CTU2 PABPN1L SLC22A31 LOC339059 LINC00304 LOC101927793 PIEZO1
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss CBFA2T3 CDT1 LOC400558 TRAPPC2L CDH15 ACSF3 LOC100129697 LOC105371409 GALNS APRT LOC107987238 PABPN1L SLC22A31 LINC00304 LOC101927793
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain CBFA2T3 ANKRD11 LOC100289580 CDT1 LOC100287036 LOC400558 TRAPPC2L CDH15 ZNF778 ACSF3 LOC100129697 LOC105371409 GALNS APRT LOC107987238 PABPN1L SLC22A31 LOC339059 LINC00304 LOC101927793 LOC105371414 PIEZO1
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain CBFA2T3 CDT1 TRAPPC2L LOC101927793 GALNS APRT LOC107987238 PIEZO1 PABPN1L
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion CBFA2T3 CDT1 TRAPPC2L LOC101927793 LOC100129697 LOC105371409 GALNS APRT LOC107987238 PABPN1L
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CBFA2T3 CDT1 LOC400558 TRAPPC2L CDH15 ACSF3 LOC100129697 LOC105371409 GALNS APRT LOC107987238 PABPN1L LINC00304 LOC101927793
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss CYBA RPL13 DBNDD1 MIR4722 CDH15 ACSF3 LOC100129697 LOC105371409 AFG3L1P SNAI3 SLC22A31 IL17C LOC339059 LOC101927793 MVD SPATA2L PRDM7 LOC105371414 CBFA2T3 ANKRD11 LOC100289580 TRAPPC2L LOC105371419 CENPBD1 SPIRE2 LOC107987238 PABPN1L TCF25 SPG7 CHMP1A FAM157C DEF8 TUBB8P7 RNF166 TUBB3 SNORD68 CDT1 LOC100287036 ZNF276 GAS8-AS1 CPNE7 LOC101927817 GALNS APRT GAS8 LINC00304 SPATA33 MC1R VPS9D1 VPS9D1-AS1 LOC107984817 LOC400558 ZNF778 DPEP1 CTU2 URAHP FANCA CDK10 PIEZO1 SNAI3-AS1
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain CBFA2T3 TRAPPC2L GALNS PABPN1L
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain CBFA2T3 LOC100289580 CDT1 TRAPPC2L MIR4722 LOC100129697 LOC105371409 GALNS APRT LOC107987238 CTU2 PABPN1L LOC339059 LOC101927793 PIEZO1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Process(es)


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