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See other PABPN1L CNV Assays ›
Gene Symbol
PABPN1L
Assay Reference Genome
Location

Chr.16:88863804 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03945699_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 390748

Gene Name:

 poly(A) binding protein nuclear 1 like (cytoplasmic)

Gene Aliases:

 PABPNL1, ePABP2

Location:

 Chr.16:88862623-88870152 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PABPN1L NM_001080487.2 NP_001073956.2
NM_001294328.1 NP_001281257.1
XM_017023230.1 XP_016878719.1
BC130001.1
BC130002.1
EU190484.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC100129697 GALNS LOC101927793 PABPN1L CDT1 LOC105371409 PIEZO1 APRT TRAPPC2L LOC107987238 CBFA2T3
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC100129697 GALNS LOC101927793 CDT1 LINC00304 LOC105371409 PIEZO1 CDH15 LOC400558 LOC339059 ZNF778 APRT TRAPPC2L LOC107987238 LOC100289580 PABPN1L CTU2 MIR4722 SLC22A31 ACSF3 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC100129697 GALNS LOC101927793 CDT1 LINC00304 LOC105371409 CDH15 LOC400558 APRT TRAPPC2L LOC107987238 PABPN1L SLC22A31 ACSF3 CBFA2T3
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC100129697 GALNS LOC101927793 CDT1 LINC00304 LOC105371409 PIEZO1 CDH15 LOC105371414 LOC400558 LOC339059 ZNF778 APRT TRAPPC2L LOC107987238 LOC100289580 PABPN1L ANKRD11 SLC22A31 LOC100287036 ACSF3 CBFA2T3
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain GALNS LOC101927793 PABPN1L CDT1 PIEZO1 APRT TRAPPC2L LOC107987238 CBFA2T3
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC100129697 GALNS LOC101927793 CDT1 LINC00304 LOC105371409 CDH15 LOC400558 APRT TRAPPC2L LOC107987238 PABPN1L ACSF3 CBFA2T3
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC100129697 GALNS LOC101927793 PABPN1L CDT1 LOC105371409 APRT TRAPPC2L LOC107987238 CBFA2T3
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SNAI3 SPG7 DPEP1 CHMP1A LOC105371409 CPNE7 ZNF778 MC1R LOC107984817 FANCA RNF166 MIR4722 IL17C URAHP SNORD68 LOC100287036 ACSF3 LOC101927793 AFG3L1P TUBB3 LOC400558 SPATA33 LOC339059 LOC105371419 APRT TRAPPC2L CENPBD1 CDK10 SPIRE2 DEF8 MVD DBNDD1 FAM157C LOC100129697 LINC00304 PIEZO1 CDH15 LOC105371414 SPATA2L PRDM7 PABPN1L TCF25 GAS8 CTU2 SLC22A31 ZNF276 VPS9D1-AS1 SNAI3-AS1 GALNS CDT1 CYBA LOC107987238 LOC100289580 VPS9D1 LOC101927817 ANKRD11 TUBB8P7 RPL13 CBFA2T3 GAS8-AS1
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain GALNS PABPN1L TRAPPC2L CBFA2T3
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain GALNS LOC101927793 CDT1 PIEZO1 LOC339059 APRT TRAPPC2L LOC107987238 LOC100289580 PABPN1L CTU2 MIR4722 CBFA2T3

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Process(es)


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