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See other SPSB3 CNV Assays ›
Gene Symbol
SPSB3
Assay Reference Genome
Location

Chr.16:1777732 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03946125_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 90864

Gene Name:

 splA/ryanodine receptor domain and SOCS box containing 3

Gene Aliases:

 C16orf31, SSB3

Location:

 Chr.16:1776712-1782605 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPSB3 NM_001324081.1 NP_001311010.1
NM_080861.3 NP_543137.2
XM_005255673.4 XP_005255730.1
AF403028.1 AAL57347.1
AK074190.1
BC007588.1
BC024244.1 AAH24244.1
BC041897.1 AAH41897.1
BC047441.1
BI768095.1
BQ930544.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571169 Chr.16:1729694 - 1789022 on Build GRCh38 Loss NME3 MRPS34 NUBP2 MAPK8IP3 SPSB3 MIR3177 EME2
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SNHG19 TPSD1 TMEM8A IFT140 MIR6767 SNORA64 RAB11FIP3 SYNGR3 LOC105371184 CRAMP1 RGS11 MPG C16orf59 SNORA78 SPSB3 LOC105371045 WASIR2 FAHD1 C16orf91 MSRB1 ECI1 ABCA17P RHOT2 ERVK13-1 HBZ PRR25 STUB1 TBC1D24 E4F1 LOC106660606 MIR1225 MIR4717 ZNF598 HN1L MRPS34 CACNA1H HAGH LOC729652 RNF151 RAB40C MRPL28 UBE2I SNHG9 SNORA10 MIR4516 LUC7L CASKIN1 LMF1-AS1 MIR6768 LOC107987233 HAGHL RPL3L MLST8 LOC100134368 C1QTNF8 MEIOB UNKL PDPK1 PIGQ NHLRC4 DECR2 HBA2 MIR662 MAPK8IP3 SSTR5-AS1 FLJ42627 DNASE1L2 NTN3 LMF1 NARFL MIR3180-5 NME3 MCRIP2 WDR24 SNRNP25 TSC2 SNORD60 NUBP2 RHBDL1 GNPTG SSTR5 NPW RPL23AP5 TSR3 METRN NTHL1 KCTD5 ABCA3 CHTF18 TELO2 ATP6V0C LOC105371038 WFIKKN1 TRAF7 RHBDF1 MIR3176 DDX11L10 GNG13 ARHGDIG LINC00235 HBM LOC652276 BRICD5 MSLN PRSS29P FAM173A IGFALS MIR6859-4 PKD1 PRR35 RPS2 MIR3677 LOC105371047 MIR6511B1 RAB26 HS3ST6 AXIN1 MIR5587 BAIAP3 METTL26 MIR3178 NOXO1 EME2 WDR90 MIR940 TBL3 LOC105371049 PDIA2 LOC105371046 TPSG1 NDUFB10 NPRL3 CLCN7 TPSAB1 SOX8 LOC101929280 POLR3K PRSS27 TPSB2 FAM234A LOC107984876 LINC00254 CCDC78 PTX4 SLC9A3R2 AMDHD2 HBA1 CCNF CAPN15 NME4 CEMP1 CCDC154 RNPS1 LOC100287175 RPUSD1 PGP JMJD8 FBXL16 TMEM204 GFER MIR3177 HBQ1
nsv571172 Chr.16:1764390 - 1817039 on Build GRCh38 Loss NME3 IGFALS MRPS34 NUBP2 MAPK8IP3 HAGH SPSB3 EME2
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion NME3 IGFALS MRPS34 NUBP2 MAPK8IP3 SPSB3 MIR3177 EME2
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss NME3 IGFALS MRPS34 NUBP2 MAPK8IP3 SPSB3 EME2
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss IGFALS IFT140 MAPK8IP3 LOC105371046 CRAMP1 NME3 HN1L MRPS34 NUBP2 HAGH SPSB3 MIR3177 EME2
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss NME3 IGFALS MRPS34 NUBP2 MAPK8IP3 SPSB3 EME2
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss IGFALS IFT140 MAPK8IP3 LOC105371046 TELO2 LOC105371047 CRAMP1 NME3 TMEM204 HN1L MRPS34 NUBP2 HAGH SPSB3 MEIOB MIR3177 FAHD1 EME2
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain NME3 IGFALS MRPS34 NUBP2 MAPK8IP3 SPSB3 EME2
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss NME3 MRPS34 MAPK8IP3 SPSB3 EME2
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss IGFALS MAPK8IP3 CRAMP1 NME3 HN1L MRPS34 NUBP2 HAGH SPSB3 MEIOB MIR3177 FAHD1 EME2
nsv457336 Chr.16:1752231 - 1791032 on Build GRCh38 Loss NME3 IGFALS MRPS34 NUBP2 MAPK8IP3 SPSB3 EME2
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion NME3 IGFALS MRPS34 NUBP2 MAPK8IP3 HAGH SPSB3 MIR3177 FAHD1 EME2

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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