Hs03947319_cn

• Gene Symbol: PABPN1L
• Assay Reference Genome Location: Chr.16:88867793 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 390748
• Gene Name: poly(A) binding protein nuclear 1 like (cytoplasmic)
• Gene Aliases: PABPNL1, ePABP2
• Location: Chr.16:88862623-88870152 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PABPN1L	XM_017023230.1			XP_016878719.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv37n68	Chr.16:88767460 - 88944903 on Build GRCh38	Loss	CBFA2T3 PABPN1L GALNS LOC101927793 TRAPPC2L LOC100129697 LOC107987238 PIEZO1 LOC105371409 APRT CDT1
nsv1063024	Chr.16:88707330 - 89238482 on Build GRCh38	Gain	LOC400558 GALNS ACSF3 LOC101927793 LOC339059 LOC100129697 LOC107987238 CDT1 CDH15 LINC00304 MIR4722 CBFA2T3 SLC22A31 PABPN1L TRAPPC2L ZNF778 PIEZO1 LOC105371409 APRT CTU2 LOC100289580
nsv1928	Chr.16:88865211 - 88897277 on Build GRCh38	Insertion	CBFA2T3 PABPN1L LOC101927793
nsv471115	Chr.16:88801844 - 89197442 on Build GRCh38	Loss	LOC400558 GALNS ACSF3 LOC101927793 LOC100129697 LOC107987238 CDT1 CDH15 LINC00304 CBFA2T3 SLC22A31 PABPN1L TRAPPC2L LOC105371409 APRT
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	LOC400558 GALNS ACSF3 LOC101927793 ANKRD11 LOC339059 LOC100129697 LOC107987238 LOC105371414 CDT1 CDH15 LINC00304 LOC100287036 CBFA2T3 SLC22A31 PABPN1L TRAPPC2L ZNF778 PIEZO1 LOC105371409 APRT LOC100289580
esv3639555	Chr.16:88745961 - 88899576 on Build GRCh38	Gain	CBFA2T3 PABPN1L GALNS LOC101927793 TRAPPC2L LOC107987238 PIEZO1 APRT CDT1
nsv952071	Chr.16:88790893 - 89019992 on Build GRCh38	Deletion	CBFA2T3 PABPN1L GALNS LOC101927793 TRAPPC2L LOC100129697 LOC107987238 LOC105371409 APRT CDT1
nsv521217	Chr.16:88805821 - 89174375 on Build GRCh38	Loss	LOC400558 GALNS ACSF3 LOC101927793 LOC100129697 LOC107987238 CDT1 CDH15 LINC00304 CBFA2T3 PABPN1L TRAPPC2L LOC105371409 APRT
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	LOC400558 FAM157C GALNS ACSF3 LOC101927793 LOC107987238 VPS9D1-AS1 DPEP1 CDT1 IL17C URAHP CBFA2T3 RPL13 DEF8 PIEZO1 PRDM7 SPATA33 APRT GAS8-AS1 LOC100289580 RNF166 LOC100129697 SNAI3 TCF25 LOC105371414 DBNDD1 SNAI3-AS1 LINC00304 LOC101927817 TUBB3 SLC22A31 PABPN1L CYBA TUBB8P7 ZNF778 SPATA2L LOC105371419 CPNE7 LOC339059 CENPBD1 CDH15 GAS8 FANCA CHMP1A LOC105371409 ZNF276 CTU2 SPG7 SPIRE2 ANKRD11 MVD AFG3L1P VPS9D1 MIR4722 LOC100287036 MC1R TRAPPC2L LOC107984817 CDK10 SNORD68
esv3639561	Chr.16:88837996 - 88882065 on Build GRCh38	Gain	CBFA2T3 PABPN1L GALNS TRAPPC2L
nsv1061256	Chr.16:88711587 - 89013365 on Build GRCh38	Gain	GALNS LOC101927793 LOC339059 LOC100129697 LOC107987238 CDT1 MIR4722 CBFA2T3 PABPN1L TRAPPC2L PIEZO1 LOC105371409 APRT CTU2 LOC100289580

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Function(s)

nucleotide binding
RNA binding