Hs03947319_cn

• Gene Symbol: PABPN1L
• Assay Reference Genome Location: Chr.16:88867793 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 390748
• Gene Name: poly(A) binding protein nuclear 1 like (cytoplasmic)
• Gene Aliases: PABPNL1, ePABP2
• Location: Chr.16:88862623-88870152 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PABPN1L	XM_017023230.1			XP_016878719.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv37n68	Chr.16:88767460 - 88944903 on Build GRCh38	Loss	GALNS APRT LOC107987238 LOC100129697 TRAPPC2L LOC101927793 CBFA2T3 PABPN1L PIEZO1 CDT1 LOC105371409
nsv1063024	Chr.16:88707330 - 89238482 on Build GRCh38	Gain	APRT LOC107987238 MIR4722 LOC100129697 ACSF3 CBFA2T3 PABPN1L PIEZO1 CDT1 LINC00304 CTU2 SLC22A31 LOC400558 GALNS TRAPPC2L LOC101927793 CDH15 LOC339059 LOC105371409 LOC100289580 ZNF778
nsv1928	Chr.16:88865211 - 88897277 on Build GRCh38	Insertion	LOC101927793 CBFA2T3 PABPN1L
nsv471115	Chr.16:88801844 - 89197442 on Build GRCh38	Loss	APRT LOC107987238 LOC100129697 ACSF3 CBFA2T3 PABPN1L CDT1 LINC00304 SLC22A31 LOC400558 GALNS TRAPPC2L LOC101927793 CDH15 LOC105371409
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	APRT LOC107987238 LOC100129697 ACSF3 CBFA2T3 LOC105371414 PABPN1L PIEZO1 CDT1 LINC00304 SLC22A31 ANKRD11 LOC100287036 LOC400558 GALNS TRAPPC2L LOC101927793 CDH15 LOC339059 LOC105371409 LOC100289580 ZNF778
esv3639555	Chr.16:88745961 - 88899576 on Build GRCh38	Gain	GALNS APRT LOC107987238 TRAPPC2L LOC101927793 CBFA2T3 PABPN1L PIEZO1 CDT1
nsv521217	Chr.16:88805821 - 89174375 on Build GRCh38	Loss	APRT LOC107987238 LOC100129697 ACSF3 CBFA2T3 PABPN1L CDT1 LINC00304 LOC400558 GALNS TRAPPC2L LOC101927793 CDH15 LOC105371409
nsv952071	Chr.16:88790893 - 89019992 on Build GRCh38	Deletion	GALNS APRT LOC107987238 LOC100129697 TRAPPC2L LOC101927793 CBFA2T3 PABPN1L CDT1 LOC105371409
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	GAS8-AS1 CDK10 CYBA PABPN1L TUBB3 ANKRD11 CPNE7 AFG3L1P RNF166 FAM157C LOC105371419 VPS9D1 LOC101927817 ZNF778 APRT ACSF3 LOC105371414 MC1R CENPBD1 GAS8 CDT1 MVD SLC22A31 LOC100287036 PRDM7 ZNF276 TCF25 LOC105371409 FANCA TUBB8P7 MIR4722 CBFA2T3 RPL13 SPATA33 SPIRE2 LINC00304 VPS9D1-AS1 LOC400558 GALNS CHMP1A LOC339059 DPEP1 LOC107984817 IL17C SNAI3-AS1 SPG7 LOC107987238 LOC100129697 DBNDD1 SNAI3 PIEZO1 SNORD68 DEF8 URAHP CTU2 TRAPPC2L LOC101927793 CDH15 LOC100289580 SPATA2L
esv3639561	Chr.16:88837996 - 88882065 on Build GRCh38	Gain	GALNS TRAPPC2L CBFA2T3 PABPN1L
dgv3065n100	Chr.16:88711587 - 88927172 on Build GRCh38	Gain	APRT LOC107987238 MIR4722 CBFA2T3 PABPN1L PIEZO1 CDT1 CTU2 GALNS TRAPPC2L LOC101927793 LOC339059 LOC100289580

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Function(s)

nucleotide binding
RNA binding