Hs03948305_cn

• Gene Symbol: PABPN1L
• Assay Reference Genome Location: Chr.16:88866947 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 390748
• Gene Name: poly(A) binding protein nuclear 1 like (cytoplasmic)
• Gene Aliases: PABPNL1, ePABP2
• Location: Chr.16:88862623-88870152 on Build GRCh38
• Assay Gene Location: Overlaps Intron 2 - Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PABPN1L	XM_017023230.1			XP_016878719.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv37n68	Chr.16:88767460 - 88944903 on Build GRCh38	Loss	PIEZO1 CBFA2T3 LOC101927793 APRT CDT1 GALNS LOC107987238 LOC100129697 LOC105371409 TRAPPC2L PABPN1L
nsv1063024	Chr.16:88707330 - 89238482 on Build GRCh38	Gain	CTU2 LOC400558 LOC339059 LOC100289580 ZNF778 LINC00304 APRT CDT1 SLC22A31 PIEZO1 MIR4722 CBFA2T3 LOC101927793 CDH15 ACSF3 GALNS LOC107987238 LOC100129697 LOC105371409 TRAPPC2L PABPN1L
nsv1928	Chr.16:88865211 - 88897277 on Build GRCh38	Insertion	CBFA2T3 LOC101927793 PABPN1L
nsv471115	Chr.16:88801844 - 89197442 on Build GRCh38	Loss	LOC400558 LINC00304 APRT CDT1 SLC22A31 CBFA2T3 LOC101927793 CDH15 ACSF3 GALNS LOC107987238 LOC100129697 LOC105371409 TRAPPC2L PABPN1L
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	LOC400558 LOC339059 LOC100289580 ZNF778 LINC00304 APRT LOC100287036 CDT1 SLC22A31 PIEZO1 CBFA2T3 LOC101927793 CDH15 ACSF3 ANKRD11 GALNS LOC107987238 LOC100129697 LOC105371409 TRAPPC2L LOC105371414 PABPN1L
esv3639555	Chr.16:88745961 - 88899576 on Build GRCh38	Gain	PIEZO1 CBFA2T3 LOC101927793 APRT CDT1 GALNS LOC107987238 TRAPPC2L PABPN1L
nsv521217	Chr.16:88805821 - 89174375 on Build GRCh38	Loss	LOC400558 LINC00304 APRT CDT1 CBFA2T3 LOC101927793 CDH15 ACSF3 GALNS LOC107987238 LOC100129697 LOC105371409 TRAPPC2L PABPN1L
nsv952071	Chr.16:88790893 - 89019992 on Build GRCh38	Deletion	CBFA2T3 LOC101927793 APRT CDT1 GALNS LOC107987238 LOC100129697 LOC105371409 TRAPPC2L PABPN1L
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	LOC101927817 CTU2 LOC400558 SPIRE2 LINC00304 APRT VPS9D1-AS1 SPATA33 MVD DEF8 GAS8-AS1 LOC105371419 MIR4722 URAHP TUBB8P7 CDH15 LOC100129697 TRAPPC2L LOC339059 GAS8 CPNE7 CDK10 CHMP1A SPG7 FANCA LOC100287036 SPATA2L SLC22A31 PRDM7 AFG3L1P ACSF3 ANKRD11 GALNS RPL13 LOC105371409 PABPN1L LOC100289580 SNAI3 LOC107984817 ZNF276 PIEZO1 SNAI3-AS1 VPS9D1 IL17C MC1R LOC107987238 LOC105371414 RNF166 FAM157C CYBA ZNF778 CENPBD1 CDT1 DBNDD1 TCF25 CBFA2T3 LOC101927793 SNORD68 TUBB3 DPEP1
esv3639561	Chr.16:88837996 - 88882065 on Build GRCh38	Gain	CBFA2T3 GALNS TRAPPC2L PABPN1L
dgv3065n100	Chr.16:88711587 - 88927172 on Build GRCh38	Gain	CTU2 LOC339059 LOC100289580 APRT CDT1 PIEZO1 MIR4722 CBFA2T3 LOC101927793 GALNS LOC107987238 TRAPPC2L PABPN1L

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Function(s)

nucleotide binding
RNA binding