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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88881145 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03953174_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 10 - Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK090985.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC107987238 PIEZO1 CBFA2T3 TRAPPC2L CDT1 PABPN1L APRT LOC105371409 GALNS LOC100129697 LOC101927793
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC107987238 ZNF778 PIEZO1 LOC339059 CDT1 PABPN1L LOC100289580 LOC400558 LOC101927793 LINC00304 ACSF3 CBFA2T3 TRAPPC2L CTU2 APRT MIR4722 SLC22A31 LOC105371409 GALNS CDH15 LOC100129697
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion CBFA2T3 PABPN1L LOC101927793
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC107987238 CDT1 PABPN1L LOC400558 LOC101927793 LINC00304 ACSF3 CBFA2T3 TRAPPC2L APRT SLC22A31 LOC105371409 GALNS CDH15 LOC100129697
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC107987238 ZNF778 PIEZO1 LOC339059 CDT1 PABPN1L LOC100289580 LOC400558 LOC101927793 LINC00304 ACSF3 CBFA2T3 TRAPPC2L APRT SLC22A31 LOC105371409 GALNS CDH15 LOC100287036 LOC100129697 ANKRD11 LOC105371414
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain LOC107987238 PIEZO1 CBFA2T3 TRAPPC2L CDT1 PABPN1L APRT GALNS LOC101927793
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC107987238 CDT1 PABPN1L LOC400558 LOC101927793 LINC00304 ACSF3 CBFA2T3 TRAPPC2L APRT LOC105371409 GALNS CDH15 LOC100129697
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC107987238 CBFA2T3 TRAPPC2L CDT1 PABPN1L APRT LOC105371409 GALNS LOC100129697 LOC101927793
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss AFG3L1P CDT1 PABPN1L CDK10 VPS9D1 TCF25 LOC400558 LINC00304 FAM157C ACSF3 CBFA2T3 SPATA33 APRT SLC22A31 LOC105371409 GALNS ANKRD11 PRDM7 GAS8 DPEP1 IL17C TUBB8P7 ZNF778 LOC339059 SPATA2L SNORD68 MVD LOC101927817 CPNE7 FANCA DBNDD1 CTU2 LOC100129697 RPL13 DEF8 LOC107987238 GAS8-AS1 SPIRE2 PIEZO1 LOC100289580 SNAI3 MC1R VPS9D1-AS1 CENPBD1 URAHP LOC107984817 TRAPPC2L MIR4722 LOC100287036 CHMP1A SPG7 LOC105371419 LOC101927793 ZNF276 CYBA TUBB3 SNAI3-AS1 CDH15 RNF166 LOC105371414
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain CBFA2T3 TRAPPC2L PABPN1L GALNS
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain LOC107987238 PIEZO1 LOC339059 CDT1 PABPN1L LOC100289580 LOC101927793 CBFA2T3 TRAPPC2L CTU2 APRT MIR4722 GALNS

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