Hs03962029_cn

• Gene Symbol: CCDC137
• Assay Reference Genome Location: Chr.17:81666732 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 339230
• Gene Name: coiled-coil domain containing 137
• Gene Aliases: RaRF
• Location: Chr.17:81666697-81673907 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CCDC137	NM_199287.2			NP_954981.1
	XM_017024573.1			XP_016880062.1
	BC009369.2			AAH09369.1
	BM548065.1
	FJ649645.1	1	1692

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv26223	Chr.17:80659041 - 81736487 on Build GRCh38	Gain+Loss	CHMP6 MRPL12 BAHCC1 LOC107985022 RPTOR TSPAN10 MIR3065 LOC105371921 OXLD1 LOC400627 HGS MIR1250 TMEM105 CCDC137 CEP131 ACTG1 FSCN2 MIR6786 LOC107985021 AATK FAAP100 ARL16 SLC25A10 LINC00482 MIR4740 NPLOC4 SLC38A10 MIR3186 TEPSIN BAIAP2-AS1 C17orf89 BAIAP2 LOC105371925 LOC100129503 MIR338 LOC101928855 LOC100130370 AATK-AS1 MIR657 PDE6G
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	MRPL12 NOTUM GPS1 BAHCC1 LRRC45 MAFG DCXR NARF CCDC57 MIR6787 STRA13 B3GNTL1 C17orf62 LOC101929511 HEXDC CCDC137 ACTG1 FN3K RFNG SNORD134 MIR6786 ZNF750 SLC16A3 AATK FAAP100 ALYREF FASN OGFOD3 SLC25A10 SECTM1 SIRT7 MIR4740 NPLOC4 SLC38A10 GCGR MIR3186 TEPSIN C17orf89 LOC105376791 LOC105371925 LOC100130370 UTS2R CSNK1D TBCD ASPSCR1 TSPAN10 MIR4525 OXLD1 HGS ANAPC11 P4HB TMEM105 CD7 LOC105371944 CEP131 RAC3 MCRIP1 FSCN2 WDR45B PYCR1 LOC105376790 PPP1R27 PCYT2 ARL16 LINC00482 MAFG-AS1 FN3KRP DUS1L LOC101929552 NPB FOXK2 AATK-AS1 PDE6G ARHGDIA TEX19 RAB40B MYADML2
nsv470620	Chr.17:81516973 - 82064485 on Build GRCh38	Loss	MRPL12 NOTUM GPS1 LRRC45 ASPSCR1 TSPAN10 MAFG DCXR STRA13 OXLD1 HGS ANAPC11 P4HB CCDC137 RAC3 MCRIP1 FSCN2 RFNG PYCR1 MIR6786 PPP1R27 FAAP100 ALYREF PCYT2 ARL16 SLC25A10 MAFG-AS1 DUS1L SIRT7 NPLOC4 GCGR NPB PDE6G ARHGDIA MYADML2
nsv952390	Chr.17:81637175 - 81860124 on Build GRCh38	Deletion	MCRIP1 MRPL12 MIR6786 PPP1R27 ARL16 TSPAN10 SLC25A10 GCGR OXLD1 HGS P4HB CCDC137 PDE6G

More Information

Additional Information:

For this assay, SNP(s) [rs114120030] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding
poly(A) RNA binding