Genomic Map
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Target Gene Details
Entrez Gene ID: | 114897 |
Gene Name: | C1q and tumor necrosis factor related protein 1 |
Gene Aliases: |
CTRP1, GIP, ZSIG37 |
Location: |
Chr.17:79022934-79049788 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| C1QTNF1 | NM_153372.1 | NP_699203.1 | ||
| DA877694.1 |
Target Gene Details
Entrez Gene ID: | 100507410 |
Gene Name: | C1QTNF1 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.17:79019209-79027655 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| C1QTNF1-AS1 | NR_040018.1 | |||
| NR_040019.1 | ||||
| DA938488.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv470610 | Chr.17:78973800 - 79091723 on Build GRCh38 | Loss |
 C1QTNF1
LGALS3BP
RBFOX3
C1QTNF1-AS1
CANT1
ENGASE
|
| nsv523650 | Chr.17:78933797 - 79165563 on Build GRCh38 | Loss |
C1QTNF1
LGALS3BP
RBFOX3
C1QTNF1-AS1
CANT1
ENGASE
|
| nsv1057193 | Chr.17:78921031 - 79481744 on Build GRCh38 | Gain |
C1QTNF1
LGALS3BP
TIMP2
RBFOX3
C1QTNF1-AS1
CANT1
ENGASE
|
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Additional Information:
For this assay, SNP(s) [rs77696401] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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