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See other P2RX5 CNV Assays ›
Gene Symbol
P2RX5
Assay Reference Genome
Location

Chr.17:3678672 on build GRCh38
Cytoband
17p13.2
Assay ID Hs03986233_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5026

Gene Name:

 purinergic receptor P2X 5

Gene Aliases:

 LRH-1, P2X5, P2X5R

Location:

 Chr.17:3673227-3696404 on Build GRCh38

Assay Gene Location:

 Within Intron 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
P2RX5 NM_001204519.1 NP_001191448.1
NM_001204520.1 NP_001191449.1
NM_002561.3 NP_002552.2
NM_175080.2 NP_778255.1
AF016709.1 AAC51931.1
AF070573.1 AAC28645.1
AK092966.1
AK290889.1
AK293610.1
AK307959.1
BC039015.1 AAH39015.1
DQ851492.1 ABI31773.1
U49395.1 AAB08576.1
U49396.1 AAB08577.1

Target Gene Details

Entrez Gene ID:

 100533970

Gene Name:

 P2RX5-TAX1BP3 readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.17:3662893-3696404 on Build GRCh38

Assay Gene Location:

 Within Intron 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
P2RX5-TAX1BP3 NR_037928.1
AB209623.1 BAD92860.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv574237 Chr.17:3486822 - 3729542 on Build GRCh38 Loss ASPA P2RX5-TAX1BP3 ITGAE GSG2 TAX1BP3 TRPV1 CTNS SPATA22 EMC6 P2RX5 TRPV3 SHPK
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain OR1E1 P2RX5-TAX1BP3 OR1D5 P2RX1 LOC105371592 LOC105371591 LOC101927911 OR1E2 OR3A2 OR1A2 GSG2 OR3A4P OR1D4 TRPV3 OR1A1 SPATA22 RAP1GAP2 P2RX5 MIR6776 CCDC92B SHPK ASPA CLUH OR1D2 ITGAE TAX1BP3 OR3A3 TRPV1 ATP2A3 PAFAH1B1 CTNS OR1G1 CAMKK1 EMC6 NCBP3 OR3A1 MIR1253
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain OR1E1 P2RX5-TAX1BP3 SPATA22 P2RX5 SHPK OR1E2 OR3A2 ASPA ITGAE GSG2 TAX1BP3 OR3A3 TRPV1 CTNS CAMKK1 EMC6 NCBP3 TRPV3
nsv1948 Chr.17:3674767 - 3719479 on Build GRCh38 Deletion P2RX5-TAX1BP3 ITGAE P2RX5
nsv833342 Chr.17:3626188 - 3806082 on Build GRCh38 Loss P2RX5-TAX1BP3 ITGAE GSG2 TAX1BP3 CTNS EMC6 P2RX5 SHPK
nsv952107 Chr.17:3640507 - 3691806 on Build GRCh38 Deletion P2RX5-TAX1BP3 TAX1BP3 CTNS EMC6 P2RX5

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More Information


Additional Information:

For this assay, SNP(s) [rs74966626] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ligand-gated ion channel

Gene Ontology Categories:

Function(s) Process(es)


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