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Gene Symbol
SLC5A10
Assay Reference Genome
Location

Chr.17:18955735 on build GRCh38
Cytoband
17p11.2
Assay ID Hs03987215_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 125206

Gene Name:

 solute carrier family 5 member 10

Gene Aliases:

 SGLT-5, SGLT5

Location:

 Chr.17:18950676-19020691 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC5A10 NM_001042450.2 NP_001035915.1
NM_001270648.1 NP_001257577.1
NM_001270649.1 NP_001257578.1
NM_001282417.1 NP_001269346.1
NM_152351.4 NP_689564.3
XM_011523652.1 XP_011521954.1
XM_011523653.2 XP_011521955.1
XM_017024191.1 XP_016879680.1
AK057946.1 BAB71619.1
AK298345.1
BC034380.1
BC039868.1 AAH39868.1
BC062617.1 AAH62617.1
BP332461.1
DR003789.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1055999 Chr.17:18695458 - 18973671 on Build GRCh38 Gain TVP23B FAM83G SLC5A10 TRIM16L FBXW10 LOC101929141 PRPSAP2
nsv457699 Chr.17:18926974 - 18987449 on Build GRCh38 Gain FAM83G SLC5A10 PRPSAP2
esv33572 Chr.17:18919047 - 19291177 on Build GRCh38 Gain GRAPL FAM83G SLC5A10 EPN2 LOC102724624 LOC79999 EPN2-IT1 SNORD3D PRPSAP2 LOC388436 GRAP SNORD3A SNORD3B-2 SNORD3C SNORD3B-1
nsv1057803 Chr.17:18561260 - 19019420 on Build GRCh38 Loss TVP23B FAM83G SLC5A10 TRIM16L ZNF286B FBXW10 LOC101929141 FOXO3B CCDC144B TBC1D28 PRPSAP2
esv2758678 Chr.17:18927303 - 19288734 on Build GRCh38 Gain+Loss GRAPL FAM83G SLC5A10 EPN2 LOC102724624 LOC79999 EPN2-IT1 SNORD3D PRPSAP2 LOC388436 GRAP SNORD3A SNORD3B-2 SNORD3C SNORD3B-1
nsv953842 Chr.17:18947088 - 19049187 on Build GRCh38 Deletion GRAP FAM83G SLC5A10
nsv523721 Chr.17:18659407 - 19014011 on Build GRCh38 Gain TVP23B FAM83G SLC5A10 TRIM16L ZNF286B FBXW10 LOC101929141 FOXO3B PRPSAP2
nsv833391 Chr.17:18906887 - 19238887 on Build GRCh38 Loss GRAPL FAM83G SLC5A10 EPN2 LOC102724624 LOC79999 SNORD3D PRPSAP2 LOC388436 GRAP SNORD3A SNORD3B-2 SNORD3C SNORD3B-1
dgv565e214 Chr.17:18920166 - 19019319 on Build GRCh38 Gain FAM83G SLC5A10 PRPSAP2
nsv428336 Chr.17:18927239 - 19288734 on Build GRCh38 Gain+Loss GRAPL FAM83G SLC5A10 EPN2 LOC102724624 LOC79999 EPN2-IT1 SNORD3D PRPSAP2 LOC388436 GRAP SNORD3A SNORD3B-2 SNORD3C SNORD3B-1
nsv833390 Chr.17:18786912 - 18976381 on Build GRCh38 Loss TVP23B FAM83G SLC5A10 LOC101929141 PRPSAP2
nsv9504 Chr.17:18389579 - 19238707 on Build GRCh38 Gain+Loss GRAPL FLJ35934 ZNF286B LOC102724624 CCDC144B LOC388436 GRAP SNORD3A TRIM16L SNORD3B-2 LOC101929141 SNORD3B-1 TVP23B FAM83G KRT17P5 SLC5A10 EPN2 LOC79999 USP32P2 TBC1D28 SNORD3D PRPSAP2 EVPLL KRT17P2 KRT16P1 FAM106A FBXW10 FOXO3B LGALS9C SNORD3C
dgv5491n54 Chr.17:18921239 - 19014011 on Build GRCh38 Gain FAM83G SLC5A10 PRPSAP2
nsv470581 Chr.17:18947699 - 19014011 on Build GRCh38 Gain FAM83G SLC5A10

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More Information


Additional Information:

For this assay, SNP(s) [rs116143252] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

secondary carrier transporter

Gene Ontology Categories:

Function(s) Process(es)


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