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See other TARM1 CNV Assays ›
Gene Symbol
TARM1
Assay Reference Genome
Location

Chr.19:54070101 on build GRCh38
Cytoband
19q13.42
Assay ID Hs04013001_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 441864

Gene Name:

 T cell-interacting, activating receptor on myeloid cells 1

Gene Aliases:

 OLT-2

Location:

 Chr.19:54069342-54081365 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TARM1 NM_001135686.2 5 743 NP_001129158.2
XM_005278278.3 5 1012 XP_005278335.1
AK301730.1 5 1028
DQ479398.1 5 743

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv458782 Chr.19:53961144 - 54093354 on Build GRCh38 Gain TARM1 VSTM1 MIR935 CACNG8 CACNG6
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion NDUFA3 TARM1 PRPF31 VSTM1 OSCAR TFPT
nsv182 Chr.19:54050737 - 54097924 on Build GRCh38 Deletion TARM1 VSTM1 OSCAR
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion LILRA5 MIR935 PRKCG MIR527 MIR518F MIR526A2 MIR518A1 MIR372 MIR518B ZNF845 LENG1 TSEN34 MIR520F MIR516B2 MIR516A1 VN1R4 MBOAT7 RPS9 MIR523 MIR517A MIR518A2 MIR521-1 MIR520E MIR516B1 ZNF818P MIR519A2 VSTM1 CACNG7 MIR1323 LILRB2 MIR520D MIR4752 MIR519C MIR519B ZNF765 NLRP12 MIR524 MIR519D NDUFA3 TARM1 MIR1283-1 PRPF31 OSCAR MIR520H TPM3P9 MIR526A1 MIR516A2 FAM90A27P BIRC8 TMC4 MIR518C LILRB5 MIR518E ZNF331 MIR519A1 MIR517B CACNG8 MIR521-2 ZNF665 MIR525 MIR519E ZNF761 ZNF525 MIR498 MIR512-2 MIR520B LOC284379 ZNF677 VN1R2 MIR1283-2 MIR518D MIR371A MIR526B MIR520G DPRX MIR515-1 TFPT MIR522 MIR512-1 MIR515-2 ZNF813 LILRB3 MIR520C MIR371B MYADM LILRA6 MIR520A LOC105372457 CNOT3 CACNG6 MIR373 MIR517C
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss NDUFA3 TARM1 PRPF31 OSCAR TFPT
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss NDUFA3 TARM1 PRPF31 VSTM1 OSCAR MIR935 CACNG8 CACNG6 TFPT

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:


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