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See other TARM1 CNV Assays ›
Gene Symbol
TARM1
Assay Reference Genome
Location

Chr.19:54074024 on build GRCh38
Cytoband
19q13.42
Assay ID Hs04020706_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 441864

Gene Name:

 T cell-interacting, activating receptor on myeloid cells 1

Gene Aliases:

 OLT-2

Location:

 Chr.19:54069342-54081365 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TARM1 NM_001135686.2 4 579 NP_001129158.2
XM_005278278.3 4 848 XP_005278335.1
AK301730.1 4 864
DQ479398.1 4 579

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv458782 Chr.19:53961144 - 54093354 on Build GRCh38 Gain VSTM1 CACNG8 TARM1 MIR935 CACNG6
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion PRPF31 VSTM1 OSCAR NDUFA3 TARM1 TFPT
nsv1056177 Chr.19:54073048 - 54112306 on Build GRCh38 Gain OSCAR NDUFA3 TARM1 TFPT
nsv182 Chr.19:54050737 - 54097924 on Build GRCh38 Deletion VSTM1 OSCAR TARM1
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion LILRB2 CNOT3 MIR520C MIR521-1 MIR519C ZNF677 MIR512-2 MIR519E MIR526A2 MIR519D MIR516A1 MIR517A MBOAT7 MIR519A2 NLRP12 VN1R2 MIR523 TPM3P9 MIR520F ZNF331 DPRX LOC284379 LILRA5 MIR373 MIR498 MIR520A TSEN34 MIR371A FAM90A27P MIR512-1 VSTM1 CACNG8 MIR526A1 MIR524 LILRB5 LENG1 MIR520D MIR517C MIR1283-1 MIR522 CACNG7 OSCAR MIR516B2 MIR518F TMC4 MIR515-1 MIR519B ZNF761 VN1R4 TFPT MIR520B MIR518A2 MIR520G MIR526B MIR518E ZNF818P MIR519A1 MIR1283-2 MIR518D MIR4752 MIR518C MIR520H ZNF845 RPS9 ZNF813 NDUFA3 MIR527 MIR521-2 MIR371B MIR517B MIR935 CACNG6 MYADM LOC105372457 MIR372 MIR1323 PRPF31 ZNF665 MIR525 MIR516B1 LILRA6 MIR518A1 ZNF765 BIRC8 ZNF525 MIR518B MIR515-2 MIR520E LILRB3 MIR516A2 TARM1 PRKCG
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss PRPF31 OSCAR NDUFA3 TARM1 TFPT
esv2718852 Chr.19:54071172 - 54081904 on Build GRCh38 Deletion TARM1
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss PRPF31 VSTM1 CACNG8 OSCAR NDUFA3 TARM1 MIR935 CACNG6 TFPT

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:


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