Genomic Map
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Target Gene Details
Entrez Gene ID: | 441864 |
Gene Name: | T cell-interacting, activating receptor on myeloid cells 1 |
Gene Aliases: |
OLT-2 |
Location: |
Chr.19:54069342-54081365 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Intron 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TARM1 | NM_001135686.2 | NP_001129158.2 | ||
| XM_005278278.3 | XP_005278335.1 | |||
| AK301730.1 | ||||
| DQ479398.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv458782 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain |
 CACNG6
MIR935
VSTM1
CACNG8
TARM1
|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
PRPF31
NDUFA3
VSTM1
OSCAR
TFPT
TARM1
|
| nsv1056177 | Chr.19:54073048 - 54112306 on Build GRCh38 | Gain |
NDUFA3
OSCAR
TFPT
TARM1
|
| nsv182 | Chr.19:54050737 - 54097924 on Build GRCh38 | Deletion |
VSTM1
OSCAR
TARM1
|
| esv29726 | Chr.19:54074910 - 54087024 on Build GRCh38 | Gain |
TARM1
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
MIR512-2
PRPF31
MIR520D
MIR520C
CACNG7
MIR1323
CACNG8
ZNF331
CACNG6
TPM3P9
MIR498
MIR371A
MIR523
NDUFA3
MIR518E
TSEN34
ZNF813
MIR518D
LILRB2
MIR519A1
RPS9
MIR4752
MIR520E
MIR526A1
MIR1283-1
MIR512-1
MIR524
MIR526A2
ZNF761
MIR515-2
TFPT
MIR527
VN1R4
MIR372
NLRP12
FAM90A27P
MYADM
ZNF665
MIR935
MBOAT7
ZNF765
ZNF525
DPRX
MIR520H
VSTM1
OSCAR
MIR519C
MIR526B
ZNF845
MIR516A1
ZNF677
MIR517C
LILRB3
LOC284379
CNOT3
MIR520B
MIR519E
TMC4
MIR525
MIR516A2
LILRB5
BIRC8
MIR522
LILRA5
LILRA6
MIR519B
MIR518F
MIR519A2
MIR520A
MIR521-1
MIR1283-2
MIR518B
MIR516B2
MIR515-1
MIR516B1
LENG1
PRKCG
MIR371B
VN1R2
MIR519D
MIR518A2
MIR373
LOC105372457
MIR520F
MIR517A
MIR521-2
MIR520G
ZNF818P
MIR517B
MIR518A1
TARM1
MIR518C
|
| nsv470157 | Chr.19:54063999 - 54127773 on Build GRCh38 | Loss |
PRPF31
NDUFA3
OSCAR
TFPT
TARM1
|
| esv2718852 | Chr.19:54071172 - 54081904 on Build GRCh38 | Deletion |
TARM1
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
CACNG6
PRPF31
NDUFA3
MIR935
VSTM1
CACNG8
OSCAR
TFPT
TARM1
|
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Additional Information:
For this assay, SNP(s) [rs77043638] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
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