Genomic Map
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Target Gene Details
Entrez Gene ID: | 441864 |
Gene Name: | T cell-interacting, activating receptor on myeloid cells 1 |
Gene Aliases: |
OLT-2 |
Location: |
Chr.19:54069342-54081365 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Intron 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TARM1 | NM_001135686.2 | NP_001129158.2 | ||
| XM_005278278.3 | XP_005278335.1 | |||
| AK301730.1 | ||||
| DQ479398.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv3653n100 | Chr.19:54073048 - 54101539 on Build GRCh38 | Gain |
 TARM1
OSCAR
|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
VSTM1
TARM1
PRPF31
OSCAR
NDUFA3
TFPT
|
| nsv580110 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain |
VSTM1
TARM1
MIR935
CACNG6
CACNG8
|
| esv29726 | Chr.19:54074910 - 54087024 on Build GRCh38 | Gain |
TARM1
|
| nsv2542 | Chr.19:54050737 - 54097924 on Build GRCh38 | Deletion |
VSTM1
TARM1
OSCAR
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
TPM3P9
MIR1283-2
VN1R2
MIR516A1
LILRA6
BIRC8
MIR520E
LILRA5
MIR372
PRKCG
MIR520B
ZNF331
MIR527
MIR519D
ZNF677
ZNF665
MIR519B
MIR498
MIR518A2
MIR515-2
MYADM
MIR935
MIR515-1
TSEN34
OSCAR
NLRP12
CACNG8
LOC105372457
MIR522
TMC4
LILRB5
MIR371A
ZNF525
VSTM1
MIR516B2
MIR520F
PRPF31
MIR525
MIR373
MIR1283-1
MIR516B1
MIR526B
MIR523
MIR521-1
ZNF818P
MBOAT7
MIR518B
FAM90A27P
MIR526A1
MIR520H
LENG1
MIR517B
MIR519E
VN1R4
NDUFA3
MIR518D
ZNF845
ZNF765
MIR518C
MIR517C
CACNG7
RPS9
LOC284379
MIR521-2
MIR519A1
MIR520A
MIR518F
MIR518E
MIR520G
DPRX
TFPT
MIR516A2
MIR517A
MIR512-1
MIR518A1
MIR520C
TARM1
MIR524
MIR371B
LILRB3
ZNF813
CNOT3
MIR512-2
MIR526A2
LILRB2
MIR519C
MIR4752
MIR1323
MIR519A2
MIR520D
ZNF761
CACNG6
|
| esv2718852 | Chr.19:54071172 - 54081904 on Build GRCh38 | Deletion |
TARM1
|
| nsv470157 | Chr.19:54063999 - 54127773 on Build GRCh38 | Loss |
TARM1
PRPF31
OSCAR
NDUFA3
TFPT
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
VSTM1
TARM1
PRPF31
MIR935
OSCAR
NDUFA3
CACNG6
CACNG8
TFPT
|
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Additional Information:
For this assay, SNP(s) [rs77043638] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
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