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See other MADCAM1 CNV Assays ›
Gene Symbol
MADCAM1
Assay Reference Genome
Location

Chr.19:502150 on build GRCh38
Cytoband
19p13.3
Assay ID Hs04023383_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8174

Gene Name:

 mucosal vascular addressin cell adhesion molecule 1

Gene Aliases:

 MACAM1

Location:

 Chr.19:496490-505343 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MADCAM1 NM_130760.2 NP_570116.2
NM_130762.2 NP_570118.1
AK092211.1
AY732484.1 AAV33123.1
AY819760.1 AAV68345.1
BC136408.1
BC137506.1
BC137507.1
BC142629.1
BC144065.1
DQ076657.1 AAY82472.1
U43628.1 AAB02194.1
U82483.1 AAC13661.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516566 Chr.19:495722 - 525739 on Build GRCh38 Gain TPGS1 MADCAM1
nsv509712 Chr.19:391096 - 558643 on Build GRCh38 Insertion GZMM TPGS1 C2CD4C ODF3L2 CDC34 MADCAM1 SHC2
esv3574264 Chr.19:490245 - 516350 on Build GRCh38 Gain TPGS1 ODF3L2 MADCAM1
nsv428360 Chr.19:232069 - 702131 on Build GRCh38 Gain PRSS57 PLPP2 MIER2 THEG C2CD4C ODF3L2 CDC34 FGF22 RNF126 GZMM TPGS1 FSTL3 HCN2 POLRMT LOC101929060 MADCAM1 BSG SHC2
dgv6155n54 Chr.19:404077 - 519032 on Build GRCh38 Loss TPGS1 C2CD4C ODF3L2 MADCAM1 SHC2
dgv1013e212 Chr.19:416231 - 521269 on Build GRCh38 Gain TPGS1 ODF3L2 MADCAM1 SHC2
esv33417 Chr.19:474104 - 518906 on Build GRCh38 Gain+Loss TPGS1 ODF3L2 MADCAM1
nsv577978 Chr.19:294526 - 782854 on Build GRCh38 Gain PRSS57 LOC101928450 MIER2 THEG C2CD4C MISP ODF3L2 CDC34 FGF22 RNF126 GZMM TPGS1 PALM FSTL3 HCN2 POLRMT LOC101929060 MADCAM1 BSG SHC2
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion GRIN3B LOC101928450 ELANE PLPPR3 RNU6-9 LOC105372235 KISS1R FGF22 TPGS1 POLR2E TMEM259 MADCAM1 CNN2 ARID3A CFD WDR18 PRSS57 GPX4 R3HDM4 MED16 THEG C2CD4C MISP ODF3L2 CDC34 MIR4745 RNF126 GZMM ARHGAP45 PALM FSTL3 HCN2 POLRMT PRTN3 PTBP1 AZU1 MIR3187 BSG ABCA7 SHC2 RNU6-2
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss GRIN3B LOC101928450 ELANE PLPPR3 RNU6-9 LOC105372235 KISS1R FGF22 TPGS1 MADCAM1 ARID3A CFD WDR18 PRSS57 R3HDM4 MED16 C2CD4C MISP ODF3L2 CDC34 MIR4745 RNF126 GZMM PALM FSTL3 HCN2 POLRMT PRTN3 PTBP1 AZU1 MIR3187 BSG SHC2
esv28250 Chr.19:470703 - 521323 on Build GRCh38 Gain+Loss TPGS1 ODF3L2 MADCAM1

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