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See other MADCAM1 CNV Assays ›
Gene Symbol
MADCAM1
Assay Reference Genome
Location

Chr.19:502150 on build GRCh38
Cytoband
19p13.3
Assay ID Hs04023383_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8174

Gene Name:

 mucosal vascular addressin cell adhesion molecule 1

Gene Aliases:

 MACAM1

Location:

 Chr.19:496490-505343 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MADCAM1 NM_130760.2 NP_570116.2
NM_130762.2 NP_570118.1
AK092211.1
AY732484.1 AAV33123.1
AY819760.1 AAV68345.1
BC136408.1
BC137506.1
BC137507.1
BC142629.1
BC144065.1
DQ076657.1 AAY82472.1
U43628.1 AAB02194.1
U82483.1 AAC13661.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516566 Chr.19:495722 - 525739 on Build GRCh38 Gain MADCAM1 TPGS1
esv3574264 Chr.19:490245 - 516350 on Build GRCh38 Gain MADCAM1 ODF3L2 TPGS1
nsv509712 Chr.19:391096 - 558643 on Build GRCh38 Insertion MADCAM1 CDC34 ODF3L2 TPGS1 GZMM C2CD4C SHC2
dgv6155n54 Chr.19:404077 - 519032 on Build GRCh38 Loss MADCAM1 ODF3L2 TPGS1 C2CD4C SHC2
nsv428360 Chr.19:232069 - 702131 on Build GRCh38 Gain FGF22 MADCAM1 BSG POLRMT MIER2 GZMM SHC2 PRSS57 FSTL3 LOC101929060 RNF126 PLPP2 CDC34 ODF3L2 TPGS1 HCN2 C2CD4C THEG
dgv1013e212 Chr.19:416231 - 521269 on Build GRCh38 Gain MADCAM1 ODF3L2 TPGS1 SHC2
esv33417 Chr.19:474104 - 518906 on Build GRCh38 Gain+Loss MADCAM1 ODF3L2 TPGS1
nsv577978 Chr.19:294526 - 782854 on Build GRCh38 Gain FGF22 MADCAM1 BSG POLRMT MIER2 MISP PALM GZMM SHC2 PRSS57 FSTL3 LOC101929060 RNF126 CDC34 LOC101928450 ODF3L2 TPGS1 HCN2 C2CD4C THEG
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion FGF22 MADCAM1 ARID3A BSG PRTN3 CFD POLR2E MIR4745 PALM GZMM SHC2 TMEM259 PRSS57 FSTL3 R3HDM4 RNU6-2 PLPPR3 CDC34 LOC101928450 ODF3L2 LOC105372235 GRIN3B HCN2 C2CD4C POLRMT RNU6-9 MIR3187 MISP ELANE CNN2 KISS1R ARHGAP45 GPX4 RNF126 PTBP1 MED16 WDR18 TPGS1 ABCA7 AZU1 THEG
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss FGF22 MADCAM1 ARID3A BSG PRTN3 CFD MIR4745 PALM GZMM SHC2 PRSS57 FSTL3 R3HDM4 PLPPR3 CDC34 LOC101928450 ODF3L2 LOC105372235 GRIN3B HCN2 C2CD4C POLRMT RNU6-9 MIR3187 MISP ELANE KISS1R RNF126 PTBP1 MED16 WDR18 TPGS1 AZU1
esv28250 Chr.19:470703 - 521323 on Build GRCh38 Gain+Loss MADCAM1 ODF3L2 TPGS1

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