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See other FCER2 CNV Assays ›
Gene Symbol
FCER2
Assay Reference Genome
Location

Chr.19:7692717 on build GRCh38
Cytoband
19p13.2
Assay ID Hs04023806_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2208

Gene Name:

 Fc fragment of IgE receptor II

Gene Aliases:

 BLAST-2, CD23, CD23A, CLEC4J, FCE2, IGEBF

Location:

 Chr.19:7688757-7702755 on Build GRCh38

Assay Gene Location:

 Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FCER2 NM_001207019.2 NP_001193948.2
NM_001220500.1 NP_001207429.1
NM_002002.4 NP_001993.2
XM_005272462.4 XP_005272519.1
AK223207.1 BAD96927.1
AK310071.1
BC014108.2 AAH14108.1
BC062591.1 AAH62591.1
M14766.1 AAA52435.1
M15059.1 AAA52434.1
X04772.1 CAA28465.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833731 Chr.19:7589114 - 7739331 on Build GRCh38 Loss PET100 XAB2 RETN FCER2 PCP2 CAMSAP3 MCEMP1 MIR6792 CLEC4G STXBP2 TRAPPC5
dgv6251n54 Chr.19:7692028 - 7694790 on Build GRCh38 Loss FCER2
nsv833732 Chr.19:7672656 - 7871329 on Build GRCh38 Gain FCER2 CD209 CLEC4M MCEMP1 CLEC4G EVI5L PRR36 TRAPPC5 CLEC4GP1
nsv1061452 Chr.19:7657750 - 7785131 on Build GRCh38 Gain RETN FCER2 CD209 CLEC4M MCEMP1 CLEC4G TRAPPC5
nsv953959 Chr.19:7669315 - 7700414 on Build GRCh38 Deletion RETN FCER2 MCEMP1 TRAPPC5
nsv1060887 Chr.19:7089546 - 7861087 on Build GRCh38 Gain PET100 PEX11G C19orf45 CD209 ZNF358 MCOLN1 MIR6792 ARHGEF18 CLEC4G LOC100128573 LOC107985283 INSR XAB2 RETN FCER2 PCP2 CAMSAP3 CLEC4M PNPLA6 MCEMP1 EVI5L STXBP2 TRAPPC5 CLEC4GP1
dgv6248n54 Chr.19:7690993 - 7693584 on Build GRCh38 Loss FCER2
esv3388356 Chr.19:7690666 - 7693264 on Build GRCh38 Duplication FCER2
dgv502e201 Chr.19:7691733 - 7692739 on Build GRCh38 Deletion FCER2
dgv6250n54 Chr.19:7691712 - 7693584 on Build GRCh38 Loss FCER2
esv2751809 Chr.19:6896369 - 7816144 on Build GRCh38 Gain PET100 PEX11G CD209 ZNF358 ARHGEF18 CLEC4G LOC107985283 MBD3L4 RETN FCER2 PCP2 CAMSAP3 PNPLA6 MBD3L2 FLJ25758 ADGRE1 STXBP2 MBD3L5 C19orf45 ZNF557 LOC729458 MCOLN1 MIR6792 LOC100128573 INSR XAB2 ADGRE4P CLEC4M MCEMP1 MBD3L3 TRAPPC5 CLEC4GP1
esv26340 Chr.19:7690078 - 7698176 on Build GRCh38 Gain FCER2
nsv578522 Chr.19:7691153 - 7694144 on Build GRCh38 Loss FCER2

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More Information


Additional Information:

For this assay, SNP(s) [rs72998491,rs72998492] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)


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