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See other FCER2 CNV Assays ›
Gene Symbol
FCER2
Assay Reference Genome
Location

Chr.19:7692717 on build GRCh38
Cytoband
19p13.2
Assay ID Hs04023806_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2208

Gene Name:

 Fc fragment of IgE receptor II

Gene Aliases:

 BLAST-2, CD23, CD23A, CLEC4J, FCE2, IGEBF

Location:

 Chr.19:7688757-7702755 on Build GRCh38

Assay Gene Location:

 Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FCER2 NM_001207019.2 NP_001193948.2
NM_001220500.1 NP_001207429.1
NM_002002.4 NP_001993.2
XM_005272462.4 XP_005272519.1
AK223207.1 BAD96927.1
AK310071.1
BC014108.2 AAH14108.1
BC062591.1 AAH62591.1
M14766.1 AAA52435.1
M15059.1 AAA52434.1
X04772.1 CAA28465.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833731 Chr.19:7589114 - 7739331 on Build GRCh38 Loss FCER2 PCP2 CLEC4G CAMSAP3 MCEMP1 MIR6792 TRAPPC5 STXBP2 XAB2 RETN PET100
dgv6251n54 Chr.19:7692028 - 7694790 on Build GRCh38 Loss FCER2
nsv833732 Chr.19:7672656 - 7871329 on Build GRCh38 Gain FCER2 CLEC4M CLEC4G MCEMP1 PRR36 TRAPPC5 CLEC4GP1 EVI5L CD209
nsv1061452 Chr.19:7657750 - 7785131 on Build GRCh38 Gain FCER2 CLEC4M CLEC4G MCEMP1 TRAPPC5 RETN CD209
nsv953959 Chr.19:7669315 - 7700414 on Build GRCh38 Deletion FCER2 MCEMP1 TRAPPC5 RETN
nsv1060887 Chr.19:7089546 - 7861087 on Build GRCh38 Gain CLEC4M ARHGEF18 CAMSAP3 C19orf45 MIR6792 INSR PNPLA6 TRAPPC5 ZNF358 CD209 PET100 FCER2 PCP2 CLEC4G MCEMP1 STXBP2 XAB2 CLEC4GP1 LOC100128573 RETN MCOLN1 PEX11G LOC107985283 EVI5L
dgv6248n54 Chr.19:7690993 - 7693584 on Build GRCh38 Loss FCER2
esv3388356 Chr.19:7690666 - 7693264 on Build GRCh38 Duplication FCER2
dgv502e201 Chr.19:7691733 - 7692739 on Build GRCh38 Deletion FCER2
dgv6250n54 Chr.19:7691712 - 7693584 on Build GRCh38 Loss FCER2
esv2751809 Chr.19:6896369 - 7816144 on Build GRCh38 Gain CLEC4M C19orf45 MIR6792 TRAPPC5 LOC729458 ZNF358 ADGRE4P MBD3L4 CD209 PET100 MBD3L3 ADGRE1 CLEC4G LOC100128573 RETN MCOLN1 PEX11G MBD3L2 LOC107985283 ARHGEF18 CAMSAP3 INSR PNPLA6 FCER2 MBD3L5 ZNF557 PCP2 MCEMP1 FLJ25758 STXBP2 XAB2 CLEC4GP1
esv26340 Chr.19:7690078 - 7698176 on Build GRCh38 Gain FCER2
nsv578522 Chr.19:7691153 - 7694144 on Build GRCh38 Loss FCER2

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More Information


Additional Information:

For this assay, SNP(s) [rs72998491,rs72998492] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)


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