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See other FCER2 CNV Assays ›
Gene Symbol
FCER2
Assay Reference Genome
Location

Chr.19:7700017 on build GRCh38
Cytoband
19p13.2
Assay ID Hs04027784_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2208

Gene Name:

 Fc fragment of IgE receptor II

Gene Aliases:

 BLAST-2, CD23, CD23A, CLEC4J, FCE2, IGEBF

Location:

 Chr.19:7688757-7702755 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FCER2 NM_001220500.1 NP_001207429.1
NM_002002.4 NP_001993.2
XM_005272462.4 XP_005272519.1
AK223207.1 BAD96927.1
AK310071.1
AK310707.1
BC014108.2 AAH14108.1
BC062591.1 AAH62591.1
DA957269.1
M14766.1 AAA52435.1
M15059.1 AAA52434.1
X04772.1 CAA28465.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953959 Chr.19:7669315 - 7700414 on Build GRCh38 Deletion FCER2 MCEMP1 TRAPPC5 RETN
nsv833731 Chr.19:7589114 - 7739331 on Build GRCh38 Loss MIR6792 FCER2 PET100 MCEMP1 XAB2 TRAPPC5 RETN CLEC4G CAMSAP3 STXBP2 PCP2
nsv1060887 Chr.19:7089546 - 7861087 on Build GRCh38 Gain C19orf45 PNPLA6 EVI5L MCOLN1 PET100 MCEMP1 LOC107985283 CLEC4GP1 CAMSAP3 INSR STXBP2 PCP2 CLEC4M MIR6792 FCER2 LOC100128573 ARHGEF18 PEX11G XAB2 ZNF358 TRAPPC5 RETN CLEC4G CD209
nsv833732 Chr.19:7672656 - 7871329 on Build GRCh38 Gain FCER2 EVI5L MCEMP1 TRAPPC5 CLEC4GP1 CLEC4G PRR36 CLEC4M CD209
esv2751809 Chr.19:6896369 - 7816144 on Build GRCh38 Gain ZNF557 MBD3L2 MCEMP1 CAMSAP3 INSR STXBP2 ADGRE1 PCP2 MIR6792 LOC100128573 LOC729458 PEX11G XAB2 CLEC4G ADGRE4P CD209 C19orf45 PNPLA6 MBD3L4 FLJ25758 MCOLN1 PET100 LOC107985283 CLEC4GP1 CLEC4M MBD3L5 FCER2 ARHGEF18 MBD3L3 ZNF358 TRAPPC5 RETN
nsv1061452 Chr.19:7657750 - 7785131 on Build GRCh38 Gain FCER2 MCEMP1 TRAPPC5 RETN CLEC4G CLEC4M CD209

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More Information


Additional Information:

For this assay, SNP(s) [rs112871344,rs113802533] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)


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