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See other TARM1 CNV Assays ›
Gene Symbol
TARM1
Assay Reference Genome
Location

Chr.19:54072398 on build GRCh38
Cytoband
19q13.42
Assay ID Hs04033259_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 441864

Gene Name:

 T cell-interacting, activating receptor on myeloid cells 1

Gene Aliases:

 OLT-2

Location:

 Chr.19:54069342-54081365 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TARM1 NM_001135686.2 NP_001129158.2
XM_005278278.3 XP_005278335.1
AK301730.1
DQ479398.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv458782 Chr.19:53961144 - 54093354 on Build GRCh38 Gain TARM1 MIR935 CACNG6 CACNG8 VSTM1
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion TARM1 OSCAR NDUFA3 VSTM1 PRPF31 TFPT
nsv182 Chr.19:54050737 - 54097924 on Build GRCh38 Deletion TARM1 OSCAR VSTM1
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion MIR520D NDUFA3 LILRA5 DPRX MIR518E LILRB2 NLRP12 MIR515-1 MIR1283-2 MIR524 CNOT3 ZNF761 CACNG8 MIR521-1 MIR518C MIR526A2 MIR517C ZNF813 MIR519E MIR520F MIR935 MIR527 MIR520H ZNF818P MIR520A MIR518A2 ZNF677 LOC105372457 TARM1 MIR525 MIR519D MIR519A2 MIR517A MIR519A1 MIR517B MIR518F MIR522 MBOAT7 VSTM1 MIR516A2 ZNF665 LILRA6 ZNF765 ZNF525 MIR519C MIR372 LOC284379 MIR521-2 MIR520G MIR1323 VN1R2 MIR518A1 VN1R4 MIR512-1 MIR526B MIR520E MIR520B MIR516B2 MIR523 LILRB5 OSCAR TPM3P9 MIR4752 MIR516B1 TSEN34 MIR515-2 CACNG6 MIR498 MIR520C PRPF31 LENG1 MIR373 MIR526A1 CACNG7 BIRC8 MIR516A1 PRKCG RPS9 LILRB3 MIR371B ZNF845 FAM90A27P ZNF331 TMC4 MIR512-2 TFPT MIR519B MIR371A MYADM MIR518D MIR1283-1 MIR518B
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss TARM1 OSCAR NDUFA3 PRPF31 TFPT
esv2718852 Chr.19:54071172 - 54081904 on Build GRCh38 Deletion TARM1
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss TARM1 OSCAR MIR935 NDUFA3 CACNG6 CACNG8 VSTM1 PRPF31 TFPT

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:


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