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See other EYA2 CNV Assays ›
Gene Symbol
EYA2
Assay Reference Genome
Location

Chr.20:47167057 on build GRCh38
Cytoband
20q13.12
Assay ID Hs04042167_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2139

Gene Name:

 EYA transcriptional coactivator and phosphatase 2

Gene Aliases:

 EAB1

Location:

 Chr.20:46894624-47188844 on Build GRCh38

Assay Gene Location:

 Within Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EYA2 NM_005244.4 NP_005235.3
NM_172110.3 NP_742108.2
XM_005260327.2 XP_005260384.1
XM_017027721.1 XP_016883210.1
AF055015.1 AAC09362.1
AK093582.1
AK293032.1
AY705349.1 AAU11525.1
BC000289.2 AAH00289.2
BC008803.2 AAH08803.1
BC013882.2 AAH13882.2
BT006682.1 AAP35328.1
U71207.1 AAB51120.1
U81601.1 AAB42065.1

Target Gene Details

Entrez Gene ID:

 100500814

Gene Name:

 microRNA 3616

Gene Aliases:

 mir-3616

Location:

 Chr.20:47166967-47167058 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MIR3616 NR_037410.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33497 Chr.20:47143439 - 47650962 on Build GRCh38 Loss LOC101927377 ZMYND8 LOC100131496 EYA2 MIR3616 NCOA3
nsv1061899 Chr.20:46498425 - 47439490 on Build GRCh38 Loss LOC101927377 OCSTAMP SLC2A10 ZNF334 ZMYND8 LOC100131496 SLC13A3 EYA2 MIR3616 TP53RK

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More Information


Additional Information:

For this assay, SNP(s) [rs78308190] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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