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See other ZGPAT CNV Assays ›
Gene Symbol
ZGPAT
Assay Reference Genome
Location

Chr.20:63730308 on build GRCh38
Cytoband
20q13.33
Assay ID Hs04043967_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84619

Gene Name:

 zinc finger CCCH-type and G-patch domain containing

Gene Aliases:

 GPATC6, GPATCH6, KIAA1847, ZC3H9, ZC3HDC9, ZIP

Location:

 Chr.20:63707442-63736142 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ZGPAT NM_001083113.1 NP_001076582.1
NM_001195653.1 NP_001182582.1
NM_001195654.1 NP_001182583.1
NM_032527.4 NP_115916.3
NM_181485.2 NP_852150.2
AB058750.3
AK027878.1 BAB55426.1
AK074961.1 BAC11317.1
AK307368.1
AK314726.1
BC019338.1 AAH19338.1
BC032612.1 AAH32612.1
CV027894.1
KU178806.1
KU178807.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2722959 Chr.20:63715664 - 63806918 on Build GRCh38 Deletion ZGPAT SLC2A4RG LIME1 ZBTB46
nsv953308 Chr.20:63650148 - 63831847 on Build GRCh38 Deletion ARFRP1 ZGPAT SLC2A4RG LIME1 RTEL1-TNFRSF6B STMN3 ZBTB46-AS1 ZBTB46 RTEL1 TNFRSF6B
nsv586614 Chr.20:63725275 - 63741460 on Build GRCh38 Gain ZGPAT SLC2A4RG LIME1
nsv1160690 Chr.20:63639552 - 63744287 on Build GRCh38 Deletion ARFRP1 ZGPAT SLC2A4RG LIME1 RTEL1-TNFRSF6B STMN3 ZBTB46 RTEL1 TNFRSF6B
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss SOX18 NPBWR2 GMEB2 OPRL1 UCKL1 PCMTD2 MIR6813 TPD52L2 SAMD10 MIR941-3 RGS19 RTEL1 LINC00176 LINC00266-1 MIR941-2 SLC2A4RG LKAAEAR1 UCKL1-AS1 MIR941-4 STMN3 MIR941-1 MIR1914 ZBTB46-AS1 MIR941-5 PRPF6 DNAJC5 C20orf181 ARFRP1 ZGPAT MYT1 LIME1 LOC100505771 RTEL1-TNFRSF6B TCEA2 MIR647 ZBTB46 ABHD16B TNFRSF6B ZNF512B
esv7227 Chr.20:63715550 - 63807161 on Build GRCh38 Loss ZGPAT SLC2A4RG LIME1 ZBTB46
nsv828801 Chr.20:63706624 - 63731055 on Build GRCh38 Loss ARFRP1 ZGPAT
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss EEF1A2 PTK6 SLC2A4RG HELZ2 SRMS STMN3 GMEB2 ARFRP1 ZGPAT LIME1 PPDPF LOC100505771 RTEL1-TNFRSF6B FNDC11 ZBTB46 RTEL1 TNFRSF6B
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss EEF1A2 PTK6 SLC2A4RG HELZ2 SRMS STMN3 GMEB2 ARFRP1 ZGPAT KCNQ2 LIME1 PPDPF LOC100505771 RTEL1-TNFRSF6B FNDC11 ZBTB46 RTEL1 TNFRSF6B

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