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See other EEF1A2 CNV Assays ›
Gene Symbol
EEF1A2
Assay Reference Genome
Location

Chr.20:63490968 on build GRCh38
Cytoband
20q13.33
Assay ID Hs04045168_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1917

Gene Name:

 eukaryotic translation elongation factor 1 alpha 2

Gene Aliases:

 EEF1AL, EF-1-alpha-2, EF1A, EIEE33, HS1, MRD38, STN, STNL

Location:

 Chr.20:63488012-63499315 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EEF1A2 NM_001958.3 NP_001949.1
AB209064.1 BAD92301.1
AB451389.1
AK307536.1
BC000432.2 AAH00432.1
BC110409.1
L10340.1 AAA91835.1
X70940.1 CAA50280.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953306 Chr.20:63151949 - 63571247 on Build GRCh38 Deletion CHRNA4 FLJ16779 FNDC11 MIR124-3 EEF1A2 PTK6 YTHDF1 LOC107985425 NKAIN4 SRMS HELZ2 PPDPF MIR3196 KCNQ2 LOC100130587 LOC102723788 LOC100130152 MIR4326 ARFGAP1 BIRC7 COL20A1
dgv7666n54 Chr.20:63460989 - 63528151 on Build GRCh38 Loss PPDPF KCNQ2 EEF1A2
nsv3448 Chr.20:63488613 - 63520639 on Build GRCh38 Insertion EEF1A2
nsv9825 Chr.20:62775470 - 63601330 on Build GRCh38 Gain FLJ16779 GMEB2 BHLHE23 FNDC11 EEF1A2 LINC00029 PTK6 YTHDF1 DIDO1 OGFR-AS1 TCFL5 SRMS HELZ2 KCNQ2 MRGBP LOC102723788 LINC01056 SLC17A9 LOC63930 MIR4326 ARFGAP1 LINC00659 CHRNA4 OGFR MIR124-3 HAR1B GID8 LOC107985425 NKAIN4 PPDPF HAR1A DPH3P1 MIR3196 LOC100130587 LOC100130152 LOC107985428 BIRC7 COL9A3 COL20A1
nsv834033 Chr.20:63421436 - 63554987 on Build GRCh38 Gain SRMS FNDC11 PPDPF KCNQ2 EEF1A2 PTK6
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss GMEB2 TNFRSF6B FNDC11 SLC2A4RG EEF1A2 PTK6 ZGPAT LIME1 LOC100505771 SRMS HELZ2 RTEL1 PPDPF STMN3 ZBTB46 RTEL1-TNFRSF6B ARFRP1
nsv834034 Chr.20:63462825 - 63625901 on Build GRCh38 Loss GMEB2 SRMS HELZ2 FNDC11 PPDPF KCNQ2 EEF1A2 PTK6
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss GMEB2 TNFRSF6B FNDC11 SLC2A4RG EEF1A2 PTK6 ZGPAT LIME1 LOC100505771 SRMS HELZ2 RTEL1 PPDPF KCNQ2 STMN3 ZBTB46 RTEL1-TNFRSF6B ARFRP1

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More Information


Additional Information:

For this assay, SNP(s) [rs77467883] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

translation factor

Gene Ontology Categories:

Function(s) Process(es)


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