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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1297048 on build GRCh38
Cytoband
1p36.33
Assay ID Hs04205718_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Within Intron 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_005244717.3 XP_005244774.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss MIR6726 UBE2J2 SCNN1D ACAP3
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR6726 SCNN1D MIR6859-2 FAAP20 LOC101928626 CDK11A MIR6808 LINC00115 ATAD3B GABRD LOC107984841 CPTP PERM1 SSU72 CPSF3L NADK LOC105378949 ATAD3A LOC102724312 LOC100132287 TTLL10-AS1 SDF4 ISG15 PUSL1 LOC100130417 SLC35E2 C1orf159 LOC100506504 GNB1 LOC148413 MXRA8 TMEM88B ACAP3 OR4F29 MMP23A TMEM240 PLEKHN1 CALML6 WASH7P ANKRD65 LOC100287934 AURKAIP1 SLC35E2B CDK11B LOC105378592 DVL1 LOC729737 MIR6723 FAM41C MIR200B LINC01128 LOC105378947 FAM132A LOC100134822 LOC100133331 MMP23B CFAP74 ATAD3C SAMD11 MIR6727 B3GALT6 AGRN MIB2 FAM138A HES4 LOC107985729 NOC2L TNFRSF18 MIR200A MTND1P23 MIR1302-2 OR4F5 TMEM52 MTND2P28 RNF223 LOC100129534 LOC105378589 VWA1 CCNL2 MORN1 LOC102725121 TNFRSF4 MIR6859-1 LOC105378948 LINC01342 DDX11L1 FAM87B LOC100288175 MIR429 KLHL17 FNDC10 LOC100288069 LOC284600 LOC105378591 PRKCZ UBE2J2 TTLL10 TAS1R3 LOC107985728 SKI MRPL20 OR4F16
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss MIR6726 UBE2J2 SCNN1D FAM132A ACAP3 B3GALT6 SDF4
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss MIR6726 CPTP DVL1 PUSL1 MIR6808 TAS1R3 CPSF3L ACAP3 MIR6727
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss MIR6726 SCNN1D ACAP3
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss MIR200B MIR6726 MIR429 SCNN1D FAM132A TNFRSF4 TNFRSF18 MIR200A C1orf159 RNF223 UBE2J2 TTLL10 ACAP3 LINC01342 B3GALT6 TTLL10-AS1 SDF4
esv3050 Chr.1:1297068 - 1297844 on Build GRCh38 Loss ACAP3
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR200B MIR6726 PUSL1 SCNN1D FAM132A TNFRSF4 C1orf159 ACAP3 LOC105378948 LINC01342 MIR6727 B3GALT6 AGRN LOC100288175 CPTP MIR429 TNFRSF18 MIR200A CPSF3L RNF223 UBE2J2 TTLL10 TAS1R3 TTLL10-AS1 SDF4
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion MIR6726 CPTP DVL1 PUSL1 MIR6808 SCNN1D TAS1R3 MXRA8 CPSF3L ACAP3 MIR6727 AURKAIP1
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MIR200B LINC01128 MIR6726 SCNN1D FAM132A MMP23B CDK11A ATAD3C SAMD11 MIR6808 MIR6727 LINC00115 ATAD3B B3GALT6 AGRN MIB2 HES4 LOC107985729 CPTP PERM1 NOC2L TNFRSF18 SSU72 MIR200A CPSF3L NADK ATAD3A RNF223 VWA1 LOC102724312 CCNL2 TTLL10-AS1 SDF4 ISG15 PUSL1 LOC100130417 TNFRSF4 SLC35E2 C1orf159 LOC148413 MXRA8 TMEM88B ACAP3 LOC105378948 LINC01342 MMP23A TMEM240 FAM87B PLEKHN1 LOC100288175 ANKRD65 MIR429 KLHL17 LOC100287934 AURKAIP1 FNDC10 LOC100288069 SLC35E2B LOC284600 CDK11B DVL1 UBE2J2 TTLL10 TAS1R3 LOC107985728 MRPL20 FAM41C
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MIR200B MIR6726 PUSL1 SCNN1D FAM132A TNFRSF4 MMP23B C1orf159 LOC148413 ATAD3C MIR6808 MXRA8 TMEM88B ACAP3 LINC01342 MIR6727 ATAD3B B3GALT6 TMEM240 MIB2 ANKRD65 LOC107985729 CPTP MIR429 TNFRSF18 SSU72 MIR200A CPSF3L AURKAIP1 FNDC10 ATAD3A CDK11B DVL1 VWA1 UBE2J2 TTLL10 TAS1R3 LOC102724312 CCNL2 MRPL20 TTLL10-AS1 SDF4
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain MIR6726 CPTP DVL1 PUSL1 MIR6808 SCNN1D TAS1R3 MXRA8 CPSF3L ACAP3 MIR6727
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MIR6726 CPTP PUSL1 SCNN1D CPSF3L AURKAIP1 DVL1 UBE2J2 MIR6808 TAS1R3 MXRA8 ACAP3 MIR6727
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain ISG15 MIR200B MIR6726 PUSL1 SCNN1D FAM132A LOC100130417 TNFRSF4 C1orf159 LOC148413 SAMD11 MIR6808 MXRA8 TMEM88B ACAP3 LOC105378948 LINC01342 MIR6727 B3GALT6 AGRN PLEKHN1 LOC100288175 HES4 ANKRD65 CPTP PERM1 MIR429 NOC2L KLHL17 TNFRSF18 MIR200A CPSF3L AURKAIP1 LOC284600 RNF223 DVL1 UBE2J2 TTLL10 TAS1R3 CCNL2 LOC107985728 MRPL20 TTLL10-AS1 SDF4
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR200B MIR6726 MIR429 PUSL1 SCNN1D FAM132A TNFRSF4 TNFRSF18 MIR200A CPSF3L UBE2J2 TTLL10 ACAP3 MIR6727 B3GALT6 TTLL10-AS1 SDF4

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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