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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228369429 on build GRCh38
Cytoband
1q42.13
Assay ID Hs04206635_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 1 507 XP_011542652.1
XM_017003091.1 1 507 XP_016858580.1
XM_017003092.1 1 507 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Intron 106
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 NP_001092093.2
NM_001271223.2 NP_001258152.2
XM_005273287.4 XP_005273344.1
XM_005273291.4 XP_005273348.1
XM_005273298.4 XP_005273355.1
XM_005273307.4 XP_005273364.1
XM_006711822.3 XP_006711885.1
XM_006711823.3 XP_006711886.1
XM_011544297.2 XP_011542599.1
XM_011544299.2 XP_011542601.1
XM_017002443.1 XP_016857932.1
XM_017002444.1 XP_016857933.1
XM_017002445.1 XP_016857934.1
XM_017002446.1 XP_016857935.1
XM_017002447.1 XP_016857936.1
XM_017002448.1 XP_016857937.1
XM_017002449.1 XP_016857938.1
XM_017002450.1 XP_016857939.1
XM_017002451.1 XP_016857940.1
XM_017002452.1 XP_016857941.1
XM_017002453.1 XP_016857942.1
XM_017002454.1 XP_016857943.1
XM_017002455.1 XP_016857944.1
XM_017002456.1 XP_016857945.1
XM_017002457.1 XP_016857946.1
XM_017002458.1 XP_016857947.1
XM_017002459.1 XP_016857948.1
XM_017002460.1 XP_016857949.1
XM_017002461.1 XP_016857950.1
XM_017002462.1 XP_016857951.1
XM_017002463.1 XP_016857952.1
XM_017002464.1 XP_016857953.1
XM_017002465.1 XP_016857954.1
XM_017002466.1 XP_016857955.1
XM_017002467.1 XP_016857956.1
XM_017002468.1 XP_016857957.1
XM_017002469.1 XP_016857958.1
XM_017002470.1 XP_016857959.1
AB046776.1 BAB13382.1
AB046859.2 BAB13465.2
AM231061.1 CAJ76912.1
DQ400343.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain ARF1 MIR3620 IBA57 MIR5008 MIR4666A WNT3A IBA57-AS1 GUK1 C1orf35 SNAP47 RNF187 MRPL55 HIST3H2BB HIST3H3 LOC107985355 GJC2 LOC101927401 MIR6742 LOC101060022 OBSCN WNT9A LOC100506571 HIST3H2A PRSS38 C1orf145 JMJD4 LOC105373289 TRIM11 TRIM17
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain MIR4666A RNA5S1 BTNL10 RNA5S15 RNA5S4 RNA5S2 RNA5S8 RNA5S7 RNF187 RNA5S9 RNA5S6 HIST3H2BB HIST3H3 RNA5S5 RNA5S12 LOC105373132 LOC101927401 RHOU RNA5S13 RNA5S3 MIR6742 DUSP5P1 OBSCN RNA5S10 RNA5S11 RNA5S16 HIST3H2A RNA5S17 RNA5S14 TRIM11 TRIM17
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss LOC101927401 HIST3H2A RNF187 HIST3H2BB MIR4666A HIST3H3 MIR6742 TRIM11 TRIM17 OBSCN
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain IBA57 RNA5S1 RNA5S15 IBA57-AS1 RNA5S4 GUK1 C1orf35 RNA5S7 SNAP47 MRPL55 RNA5S9 HIST3H2BB LOC107985355 RNA5S5 GJC2 LOC101927401 RHOU RNA5S13 RNA5S3 MIR6742 DUSP5P1 LOC101060022 OBSCN WNT9A RNA5S11 RNA5S16 PRSS38 C1orf145 JMJD4 RNA5S14 LOC105373289 ARF1 MIR3620 MIR5008 MIR4666A BTNL10 WNT3A RNA5S2 RNA5S8 RNF187 RNA5S6 HIST3H3 RNA5S12 LOC105373132 RNA5S10 LOC100506571 HIST3H2A RNA5S17 TRIM11 TRIM17
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss GJC2 LOC101927401 IBA57 MIR4666A MIR6742 OBSCN IBA57-AS1 GUK1 HIST3H2A C1orf145 HIST3H2BB HIST3H3 TRIM11 TRIM17
nsv549295 Chr.1:228276547 - 228413937 on Build GRCh38 Loss LOC101927401 MIR6742 TRIM11 TRIM17 OBSCN
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss ARF1 MIR3620 IBA57 MIR5008 MIR4666A WNT3A IBA57-AS1 GUK1 C1orf35 RNF187 MRPL55 HIST3H2BB HIST3H3 LOC107985355 GJC2 LOC101927401 MIR6742 LOC101060022 OBSCN WNT9A LOC100506571 HIST3H2A C1orf145 TRIM11 TRIM17
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion LOC101927401 HIST3H3 MIR6742 TRIM11 TRIM17 OBSCN
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion LOC101927401 OBSCN

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