Hs04239992_cn

• Gene Symbol: AGBL5
• Assay Reference Genome Location: Chr.2:27065242 on build GRCh38
• Cytoband: 2p23.3

Target Gene Details

• Entrez Gene ID: 60509
• Gene Name: ATP/GTP binding protein like 5
• Gene Aliases: CCP5, RP75
• Location: Chr.2:27051423-27070622 on Build GRCh38
• Assay Gene Location: Within Intron 13

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AGBL5	NM_021831.5			NP_068603.4
	NR_104246.1
	XM_005264477.2			XP_005264534.1
	XM_011533011.2			XP_011531313.1
	XM_011533012.2			XP_011531314.1
	XM_011533013.2			XP_011531315.1
	AL833844.1			CAD38704.1
	BC007415.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv6744n54	Chr.2:26973431 - 27151141 on Build GRCh38	Loss	MAPRE3 CGREF1 TCF23 ABHD1 KHK PREB PRR30 TMEM214 EMILIN1 LOC100129724 TRA-AGC8-1 OST4 AGBL5 AGBL5-AS1
nsv817673	Chr.2:27037601 - 27163931 on Build GRCh38	Gain	KHK CGREF1 PREB PRR30 TCF23 TMEM214 ABHD1 EMILIN1 TRA-AGC8-1 OST4 AGBL5 AGBL5-AS1
nsv833603	Chr.2:27059106 - 27263631 on Build GRCh38	Loss	SLC5A6 CGREF1 TCF23 ABHD1 SLC30A3 KHK PREB PRR30 EMILIN1 CAD OST4 AGBL5 ATRAID
nsv455974	Chr.2:26989775 - 27128411 on Build GRCh38	Loss	KHK MAPRE3 CGREF1 TMEM214 ABHD1 EMILIN1 LOC100129724 TRA-AGC8-1 OST4 AGBL5 AGBL5-AS1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

metalloprotease

Gene Ontology Categories:

Process(es)

proteolysis
protein deglutamylation
protein branching point deglutamylation
defense response to virus

Function(s)

metallocarboxypeptidase activity
zinc ion binding
tubulin binding