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Gene Symbol
SLC26A1
Assay Reference Genome
Location

Chr.4:985099 on build GRCh38
Cytoband
4p16.3
Assay ID Hs04273325_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10861

Gene Name:

 solute carrier family 26 member 1

Gene Aliases:

 CAON, EDM4, SAT-1, SAT1

Location:

 Chr.4:979073-993440 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC26A1 NM_134425.2 NP_602297.1
BC015517.2 AAH15517.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv822428 Chr.4:968896 - 1028144 on Build GRCh38 Gain FGFRL1 IDUA DGKQ SLC26A1
nsv1003219 Chr.4:776106 - 1111676 on Build GRCh38 Gain FGFRL1 RNF212 IDUA LOC100129917 TMEM175 CPLX1 DGKQ SLC26A1 GAK
esv3599384 Chr.4:974637 - 1010875 on Build GRCh38 Gain IDUA SLC26A1
nsv593226 Chr.4:948218 - 1025223 on Build GRCh38 Loss FGFRL1 IDUA TMEM175 DGKQ SLC26A1
esv3599385 Chr.4:983183 - 986434 on Build GRCh38 Loss SLC26A1
nsv4196 Chr.4:961755 - 1004599 on Build GRCh38 Deletion IDUA DGKQ SLC26A1
nsv822425 Chr.4:546316 - 1420011 on Build GRCh38 Loss CTBP1-AS2 UVSSA DGKQ PCGF3 MFSD7 CRIPAK LOC101928548 LOC105374344 CPLX1 ATP5I MAEA FGFRL1 RNF212 IDUA LOC101928521 LOC100129917 SPON2 PDE6B NKX1-1 TMEM175 MYL5 SLC26A1 GAK TMED11P LOC100130872 CTBP1 LOC107986211 CTBP1-AS
nsv469998 Chr.4:815805 - 1093743 on Build GRCh38 Loss FGFRL1 RNF212 IDUA TMEM175 CPLX1 DGKQ SLC26A1 GAK
dgv1450e212 Chr.4:976838 - 986842 on Build GRCh38 Gain SLC26A1
nsv1008352 Chr.4:819605 - 1041628 on Build GRCh38 Gain FGFRL1 IDUA TMEM175 CPLX1 DGKQ SLC26A1 GAK

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More Information


Additional Information:

For this assay, SNP(s) [rs192526712] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Function(s) Process(es)


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