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See other AGPAT2 CNV Assays ›
Gene Symbol
AGPAT2
Assay Reference Genome
Location

Chr.9:136681229 on build GRCh38
Cytoband
9q34.3
Assay ID Hs04370106_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10555

Gene Name:

 1-acylglycerol-3-phosphate O-acyltransferase 2

Gene Aliases:

 1-AGPAT2, BSCL, BSCL1, LPAAB, LPAAT-beta

Location:

 Chr.9:136673143-136687459 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AGPAT2 NM_001012727.1 NP_001012745.1
NM_006412.3 NP_006403.2
AF000237.1 AAC51649.1
AF011374.1 AAB64299.1
BC000026.2 AAH00026.1
BC004529.2 AAH04529.1
BC019292.1 AAH19292.1
BF347518.1
CN407343.1
U56418.2 AAB58776.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13005n54 Chr.9:136605258 - 136696482 on Build GRCh38 Loss EGFL7 HSPC324 MIR126 LINC01451 AGPAT2
nsv509334 Chr.9:136514168 - 136724663 on Build GRCh38 Insertion EGFL7 HSPC324 MIR126 LINC01451 MIR4674 SNHG7 MIR4673 AGPAT2 NOTCH1 FAM69B NALT1
nsv951203 Chr.9:136562849 - 136770848 on Build GRCh38 Deletion MIR6722 EGFL7 HSPC324 SNORA17A AGPAT2 FAM69B LCN15 LCN6 MIR126 LINC01451 SNHG7 LOC100128593 SNORA17B LCN8 LCN10
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss HSPC324 TMEM210 PRR31 MIR4674 LOC101930307 NOTCH1 EDF1 CCDC183-AS1 LCNL1 MAMDC4 PHPT1 LCN6 FUT7 C8G ABCA2 LOC100128593 MIR4673 MAN1B1 SEC16A LCN10 GRIN1 PMPCA LRRC26 MIR3621 NALT1 MIR126 TRAF2 SNHG7 C9orf163 SNAPC4 SDCCAG3 LCN12 C9orf172 RABL6 MIR4479 EGFL7 CLIC3 MIR4292 DPP7 FBXW5 SNORA17B CCDC183 NPDC1 SAPCD2 C9orf139 LCN8 MIR6722 SNORA17A AGPAT2 MAN1B1-AS1 FAM69B LCN15 DNLZ PTGDS C9orf142 TMEM141 LINC01451 ENTPD2 UAP1L1 CARD9 INPP5E
esv2759720 Chr.9:136356377 - 136932033 on Build GRCh38 Loss C9orf172 RABL6 MIR4479 EGFL7 HSPC324 MIR4674 NOTCH1 MIR4292 EDF1 CCDC183-AS1 MAMDC4 PHPT1 LCN6 LOC100128593 SNORA17B CCDC183 GPSM1 MIR4673 LCN8 SEC16A LCN10 MIR6722 PMPCA SNORA17A AGPAT2 FAM69B LCN15 NALT1 DNLZ TMEM141 MIR126 LINC01451 TRAF2 SNHG7 C9orf163 SNAPC4 CARD9 SDCCAG3 INPP5E
nsv8579 Chr.9:136505432 - 136760256 on Build GRCh38 Gain MIR6722 EGFL7 HSPC324 SNORA17A MIR4674 AGPAT2 NOTCH1 FAM69B LCN15 NALT1 LCN6 MIR126 LINC01451 SNHG7 LOC100128593 SNORA17B MIR4673 LCN8 LCN10
nsv1053781 Chr.9:136590694 - 136722927 on Build GRCh38 Gain EGFL7 HSPC324 MIR126 LINC01451 AGPAT2 FAM69B
dgv957n27 Chr.9:136619086 - 136725859 on Build GRCh38 Loss EGFL7 HSPC324 MIR126 SNHG7 AGPAT2 FAM69B
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion RNF208 NELFB HSPC324 TMEM210 PRR31 LOC101930307 EDF1 NRARP CCDC183-AS1 LCNL1 MAMDC4 PHPT1 LCN6 EXD3 FUT7 C8G ABCA2 LOC100128593 MAN1B1 TUBB4B LCN10 GRIN1 TOR4A ANAPC2 SLC34A3 LRRC26 MIR3621 STPG3 C9orf173-AS1 CYSRT1 MIR126 TRAF2 SNHG7 TPRN LCN12 C9orf172 RABL6 MIR4479 EGFL7 CLIC3 FAM166A MIR4292 DPP7 FBXW5 NDOR1 SNORA17B CCDC183 NPDC1 SAPCD2 RNF224 TMEM203 C9orf139 LCN8 MIR6722 SNORA17A AGPAT2 MAN1B1-AS1 FAM69B LCN15 PTGDS C9orf142 TMEM141 LINC01451 SSNA1 ENTPD2 UAP1L1

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