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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:887960 on build GRCh38
Cytoband
11p15.5
Assay ID Hs04394297_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain POLR2L PIDD1 LOC171391 AP2A2 RPLP2 CRACR2B CEND1 PNPLA2 SLC25A22 PDDC1 CD151 TSPAN4 PANO1 CHID1 SNORA52
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss AP2A2 LOC101927503 MUC6 CHID1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss POLR2L PIDD1 AP2A2 HRAS TALDO1 SIGIRR CRACR2B LOC101059906 MUC2 PHRF1 EPS8L2 SLC25A22 RASSF7 PDDC1 PTDSS2 RNH1 ANO9 IRF7 MUC6 CD151 DRD4 MUC5AC TSPAN4 PANO1 CHID1 TOLLIP SCT LOC171391 RPLP2 DEAF1 LMNTD2 LOC143666 MUC5B CDHR5 TMEM80 TOLLIP-AS1 MIR6744 CEND1 PNPLA2 MIR210 LOC101927503 MIR210HG LRRC56 SNORA52
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion POLR2L PKP3 PIDD1 AP2A2 HRAS TALDO1 SIGIRR CRACR2B LOC101059906 PHRF1 EPS8L2 SLC25A22 RASSF7 PDDC1 PTDSS2 RNH1 ANO9 IRF7 CD151 B4GALNT4 DRD4 TSPAN4 PANO1 CHID1 SCT LOC171391 RPLP2 DEAF1 LMNTD2 LOC143666 CDHR5 TMEM80 CEND1 PNPLA2 MIR210 MIR210HG LRRC56 SNORA52
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion AP2A2 BRSK2 MUC5B TOLLIP-AS1 MUC2 MIR6744 LOC101927503 MUC6 MUC5AC TSPAN4 CHID1 MOB2 TOLLIP
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion POLR2L PIDD1 HRAS TALDO1 CRACR2B LOC101059906 PHRF1 EPS8L2 SLC25A22 RASSF7 PDDC1 PTDSS2 RNH1 IRF7 CD151 DRD4 TSPAN4 PANO1 CHID1 SCT LOC171391 RPLP2 DEAF1 LMNTD2 LOC143666 CDHR5 TMEM80 CEND1 PNPLA2 MIR210 MIR210HG LRRC56 SNORA52
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain AP2A2 CHID1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss POLR2L PKP3 PIDD1 AP2A2 HRAS TALDO1 SIGIRR CRACR2B LOC101059906 MUC2 PHRF1 EPS8L2 SLC25A22 RASSF7 PDDC1 PTDSS2 RNH1 ANO9 IRF7 MUC6 CD151 B4GALNT4 DRD4 MUC5AC TSPAN4 PANO1 CHID1 TOLLIP SCT LOC171391 RPLP2 DEAF1 LMNTD2 LOC143666 MUC5B CDHR5 TMEM80 MIR6744 CEND1 PNPLA2 MIR210 LOC101927503 MIR210HG LRRC56 SNORA52
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain AP2A2 MUC6 TSPAN4 CHID1
esv2671662 Chr.11:883886 - 889968 on Build GRCh38 Deletion CHID1
esv3625089 Chr.11:883903 - 889936 on Build GRCh38 Loss CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion AP2A2 BRSK2 MUC5B TOLLIP-AS1 MUC2 MIR6744 LOC101927503 MUC6 MUC5AC TSPAN4 CHID1 MOB2 TOLLIP
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss POLR2L PIDD1 AP2A2 RPLP2 CRACR2B CD151 TSPAN4 CHID1 SNORA52 PNPLA2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss POLR2L PIDD1 LOC171391 RPLP2 CRACR2B CEND1 PNPLA2 SLC25A22 PDDC1 CD151 TSPAN4 PANO1 CHID1 SNORA52
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain POLR2L CRACR2B CD151 TSPAN4 CHID1 PNPLA2
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion POLR2L PIDD1 LOC171391 TALDO1 RPLP2 CRACR2B CEND1 PNPLA2 SLC25A22 PDDC1 CD151 TSPAN4 PANO1 CHID1 SNORA52

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