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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:887960 on build GRCh38
Cytoband
11p15.5
Assay ID Hs04394297_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss MUC6 LOC101927503 CHID1 AP2A2
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain LOC171391 RPLP2 SLC25A22 CHID1 AP2A2 POLR2L CEND1 SNORA52 TSPAN4 PNPLA2 PDDC1 CD151 PIDD1 PANO1 CRACR2B
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LOC171391 EPS8L2 CDHR5 PHRF1 LRRC56 SLC25A22 CHID1 LOC143666 PTDSS2 RASSF7 IRF7 POLR2L TSPAN4 MUC6 MUC5B RNH1 MUC2 MIR6744 PIDD1 TOLLIP-AS1 DRD4 CRACR2B RPLP2 LOC101059906 LMNTD2 TOLLIP AP2A2 MIR210HG DEAF1 ANO9 CEND1 SNORA52 PNPLA2 PDDC1 TMEM80 SCT MUC5AC HRAS LOC101927503 TALDO1 CD151 SIGIRR MIR210 PANO1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LOC171391 EPS8L2 CDHR5 PHRF1 LRRC56 SLC25A22 CHID1 LOC143666 PTDSS2 RASSF7 IRF7 POLR2L B4GALNT4 TSPAN4 RNH1 PIDD1 DRD4 CRACR2B PKP3 RPLP2 LOC101059906 LMNTD2 AP2A2 MIR210HG DEAF1 ANO9 CEND1 SNORA52 PNPLA2 PDDC1 TMEM80 SCT HRAS TALDO1 CD151 SIGIRR MIR210 PANO1
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion TOLLIP MOB2 CHID1 AP2A2 TSPAN4 MUC6 MUC5AC MUC5B BRSK2 LOC101927503 MUC2 MIR6744 TOLLIP-AS1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LOC171391 EPS8L2 CDHR5 PHRF1 LRRC56 SLC25A22 CHID1 LOC143666 PTDSS2 RASSF7 IRF7 POLR2L TSPAN4 RNH1 PIDD1 DRD4 CRACR2B RPLP2 LOC101059906 LMNTD2 MIR210HG DEAF1 CEND1 SNORA52 PNPLA2 PDDC1 TMEM80 SCT HRAS TALDO1 CD151 MIR210 PANO1
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain CHID1 AP2A2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LOC171391 EPS8L2 CDHR5 PHRF1 LRRC56 SLC25A22 CHID1 LOC143666 PTDSS2 RASSF7 IRF7 POLR2L B4GALNT4 TSPAN4 MUC6 MUC5B RNH1 MUC2 MIR6744 PIDD1 DRD4 CRACR2B PKP3 RPLP2 LOC101059906 LMNTD2 TOLLIP AP2A2 MIR210HG DEAF1 ANO9 CEND1 SNORA52 PNPLA2 PDDC1 TMEM80 SCT MUC5AC HRAS LOC101927503 TALDO1 CD151 SIGIRR MIR210 PANO1
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain TSPAN4 MUC6 CHID1 AP2A2
esv3625089 Chr.11:883903 - 889936 on Build GRCh38 Loss CHID1
esv2671662 Chr.11:883886 - 889968 on Build GRCh38 Deletion CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion TOLLIP MOB2 CHID1 AP2A2 TSPAN4 MUC6 MUC5AC MUC5B BRSK2 LOC101927503 MUC2 MIR6744 TOLLIP-AS1
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss SNORA52 TSPAN4 PNPLA2 RPLP2 CD151 CHID1 AP2A2 PIDD1 POLR2L CRACR2B
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss LOC171391 RPLP2 SLC25A22 CHID1 POLR2L CEND1 SNORA52 TSPAN4 PNPLA2 PDDC1 CD151 PIDD1 PANO1 CRACR2B
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain TSPAN4 PNPLA2 CD151 CHID1 POLR2L CRACR2B
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion LOC171391 RPLP2 SLC25A22 CHID1 POLR2L CEND1 SNORA52 TSPAN4 PNPLA2 PDDC1 TALDO1 CD151 PIDD1 PANO1 CRACR2B

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