Hs04409090_cn

• Gene Symbol: CCDC59
• Assay Reference Genome Location: Chr.12:82352297 on build GRCh38
• Cytoband: 12q21.31

Target Gene Details

• Entrez Gene ID: 29080
• Gene Name: coiled-coil domain containing 59
• Gene Aliases: BR22, HSPC128, TAP26
• Location: Chr.12:82352304-82358805 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CCDC59	NM_014167.4			NP_054886.2
	NR_033192.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv559539	Chr.12:81887018 - 82502439 on Build GRCh38	Gain	LOC101928449 CCDC59 METTL25
nsv832471	Chr.12:82185174 - 82361581 on Build GRCh38	Loss	CCDC59 METTL25
nsv559541	Chr.12:82321431 - 82714616 on Build GRCh38	Gain	TMTC2 CCDC59 METTL25

More Information

Additional Information:

For this assay, SNP(s) [rs114042587] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
transcription, DNA-templated
regulation of transcription, DNA-templated
cellular protein metabolic process

Function(s)

protein binding
poly(A) RNA binding