Hs04448198_cn

• Gene Symbol: SCG5
• Assay Reference Genome Location: Chr.15:32654649 on build GRCh38
• Cytoband: 15q13.3

Target Gene Details

• Entrez Gene ID: 6447
• Gene Name: secretogranin V
• Gene Aliases: 7B2, P7B2, SGNE1, SgV
• Location: Chr.15:32641669-32697097 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCG5	NM_001144757.1			NP_001138229.1
	NM_003020.3			NP_003011.1
	AK314965.1
	BC005349.1			AAH05349.1
	BC093053.1			AAH93053.1
	BP377248.1
	CR541824.1			CAG46623.1
	Y00757.1			CAA68726.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv517740	Chr.15:31727863 - 32666510 on Build GRCh38	Gain+Loss	LOC100996255 CHRNA7 WHAMMP1 LOC100653133 LOC105370757 LOC101060588 ARHGAP11A LOC105370940 GOLGA8O ULK4P1 GOLGA8N SCG5 LOC101928042 GOLGA8K
nsv456785	Chr.15:32633875 - 33060788 on Build GRCh38	Gain	LOC100131315 SCG5 LOC105370757 FMN1 ARHGAP11A GREM1
esv3581613	Chr.15:32653911 - 32658714 on Build GRCh38	Loss	SCG5
nsv428302	Chr.15:31646275 - 32694378 on Build GRCh38	Gain+Loss	LOC100996255 OTUD7A CHRNA7 WHAMMP1 LOC100653133 LOC105370757 LOC101060588 ARHGAP11A LOC105370940 GOLGA8O ULK4P1 GOLGA8N SCG5 LOC101928042 GOLGA8K
esv2760023	Chr.15:31474097 - 32694378 on Build GRCh38	Gain+Loss	LOC100996255 OTUD7A CHRNA7 WHAMMP1 LOC100653133 LOC105370757 LOC101060588 ARHGAP11A LOC105370940 GOLGA8O ULK4P1 GOLGA8N SCG5 LOC101928042 GOLGA8K
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	LOC101928134 EMC7 PGBD4 GOLGA8A MIR1233-2 LOC100131315 NUTM1 LOC105370757 GOLGA8B KATNBL1 EMC4 ARHGAP11A CHRM5 GREM1 SLC12A6 LPCAT4 TMCO5B RYR3 AVEN SCG5 MIR1233-1 LOC101928042 FMN1 NOP10
nsv483039	Chr.15:32574635 - 32751321 on Build GRCh38	Gain	LOC100996255 GOLGA8N LOC100131315 SCG5 LOC101928042 LOC105370757 ARHGAP11A GREM1
esv3892661	Chr.15:32393132 - 32776080 on Build GRCh38	Gain	LOC100996255 WHAMMP1 LOC100131315 LOC100653133 LOC105370757 LOC101060588 ARHGAP11A GOLGA8O GREM1 ULK4P1 GOLGA8N SCG5 LOC101928042 FMN1 GOLGA8K
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	CHRNA7 LOC100131315 NUTM1 LOC105370757 GOLGA8B KATNBL1 LOC101060588 ARHGAP11A CHRM5 GREM1 SLC12A6 FMN1 GOLGA8K NOP10 LOC101928134 LOC100996255 EMC7 PGBD4 WHAMMP1 GOLGA8A MIR1233-2 LOC100653133 EMC4 LOC105370940 GOLGA8O ULK4P1 LPCAT4 GOLGA8N TMCO5B RYR3 AVEN SCG5 MIR1233-1 LOC101928042
nsv469587	Chr.15:32529739 - 32694378 on Build GRCh38	Loss	LOC100996255 GOLGA8N WHAMMP1 SCG5 LOC101928042 LOC105370757 ARHGAP11A
esv2422296	Chr.15:32506737 - 32929014 on Build GRCh38	Duplication	LOC100996255 GOLGA8N WHAMMP1 LOC100131315 SCG5 LOC101928042 LOC105370757 FMN1 ARHGAP11A GREM1
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	LOC100131315 NUTM1 LOC105370757 GOLGA8B KATNBL1 ARHGAP11A CHRM5 GREM1 SLC12A6 FMN1 NOP10 LOC101928134 EMC7 PGBD4 GOLGA8A MIR1233-2 EMC4 LPCAT4 GOLGA8N TMCO5B RYR3 AVEN SCG5 MIR1233-1 LOC101928042

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Process(es)

intracellular protein transport
neuropeptide signaling pathway
peptide hormone processing
negative regulation of catalytic activity
regulation of hormone secretion

Function(s)

enzyme inhibitor activity
protein binding
GTP binding
unfolded protein binding