Hs04449672_cn

• Gene Symbol: SCG5
• Assay Reference Genome Location: Chr.15:32641983 on build GRCh38
• Cytoband: 15q13.3

Target Gene Details

• Entrez Gene ID: 6447
• Gene Name: secretogranin V
• Gene Aliases: 7B2, P7B2, SGNE1, SgV
• Location: Chr.15:32641669-32697097 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCG5	NM_001144757.1			NP_001138229.1
	NM_003020.3			NP_003011.1
	AK314965.1
	BC005349.1			AAH05349.1
	BC093053.1			AAH93053.1
	BP377248.1
	Y00757.1			CAA68726.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv517740	Chr.15:31727863 - 32666510 on Build GRCh38	Gain+Loss	GOLGA8O GOLGA8K CHRNA7 GOLGA8N LOC101060588 LOC105370757 LOC100653133 LOC105370940 ULK4P1 SCG5 LOC100996255 ARHGAP11A WHAMMP1 LOC101928042
nsv456785	Chr.15:32633875 - 33060788 on Build GRCh38	Gain	SCG5 LOC100131315 GREM1 ARHGAP11A FMN1 LOC105370757
nsv1481	Chr.15:32635939 - 32642395 on Build GRCh38	Deletion	SCG5 ARHGAP11A
nsv428302	Chr.15:31646275 - 32694378 on Build GRCh38	Gain+Loss	GOLGA8O OTUD7A GOLGA8K CHRNA7 GOLGA8N LOC101060588 LOC105370757 LOC100653133 LOC105370940 ULK4P1 SCG5 LOC100996255 ARHGAP11A WHAMMP1 LOC101928042
esv2760023	Chr.15:31474097 - 32694378 on Build GRCh38	Gain+Loss	GOLGA8O OTUD7A GOLGA8K CHRNA7 GOLGA8N LOC101060588 LOC105370757 LOC100653133 LOC105370940 ULK4P1 SCG5 LOC100996255 ARHGAP11A WHAMMP1 LOC101928042
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	MIR1233-1 GOLGA8B EMC7 LPCAT4 GREM1 SLC12A6 PGBD4 EMC4 LOC101928134 LOC105370757 MIR1233-2 TMCO5B CHRM5 SCG5 KATNBL1 NOP10 RYR3 LOC100131315 ARHGAP11A NUTM1 AVEN FMN1 GOLGA8A LOC101928042
nsv483039	Chr.15:32574635 - 32751321 on Build GRCh38	Gain	SCG5 LOC100996255 LOC100131315 GREM1 ARHGAP11A GOLGA8N LOC105370757 LOC101928042
esv3892661	Chr.15:32393132 - 32776080 on Build GRCh38	Gain	GOLGA8O GOLGA8K GREM1 GOLGA8N LOC101060588 LOC105370757 LOC100653133 ULK4P1 SCG5 LOC100996255 LOC100131315 ARHGAP11A WHAMMP1 FMN1 LOC101928042
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	GOLGA8O GOLGA8B LPCAT4 GREM1 SLC12A6 PGBD4 LOC101060588 LOC101928134 LOC105370757 MIR1233-2 ULK4P1 SCG5 KATNBL1 RYR3 ARHGAP11A AVEN WHAMMP1 FMN1 LOC101928042 MIR1233-1 GOLGA8K EMC7 CHRNA7 GOLGA8N EMC4 LOC100653133 LOC105370940 TMCO5B CHRM5 LOC100996255 NOP10 LOC100131315 NUTM1 GOLGA8A
nsv469587	Chr.15:32529739 - 32694378 on Build GRCh38	Loss	SCG5 LOC100996255 ARHGAP11A GOLGA8N WHAMMP1 LOC105370757 LOC101928042
esv2422296	Chr.15:32506737 - 32929014 on Build GRCh38	Duplication	SCG5 LOC100996255 LOC100131315 GREM1 ARHGAP11A GOLGA8N WHAMMP1 FMN1 LOC105370757 LOC101928042
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	GOLGA8B LPCAT4 GREM1 SLC12A6 PGBD4 LOC101928134 LOC105370757 MIR1233-2 SCG5 KATNBL1 RYR3 ARHGAP11A AVEN FMN1 LOC101928042 MIR1233-1 EMC7 GOLGA8N EMC4 TMCO5B CHRM5 NOP10 LOC100131315 NUTM1 GOLGA8A

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Process(es)

intracellular protein transport
neuropeptide signaling pathway
peptide hormone processing
negative regulation of catalytic activity
regulation of hormone secretion

Function(s)

enzyme inhibitor activity
protein binding
GTP binding
unfolded protein binding